Gene Avi_2694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2694 
SymbolaccF 
ID7388357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2232990 
End bp2233790 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content57% 
IMG OID643651758 
Productagrocinopine phosphodiesterase 
Protein accessionYP_002549945 
Protein GI222148988 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCGC TCAGAATGAC CATTGAGACG ATGCTCCTTG GCGGCCATCG CGGACATAGC 
GCCGGAGCGC CGGAAAACAC ACTTGCCGCG TTTCGAAAGG CTTTCGAATA TGCCGGCCCT
CTTGTCACTT GCGAGACCGA TCTCAGCATC ACCAGCGATG GCGAACTGGT GCTGATGCAC
GACAAGACGG TCGATCGGAC CACCAACGGC CGTGGCATCA TCCAGAAGAT GACTTATTCG
GAAGTCTCCA GGCTGGACGC CGGAAGCTGG TTCGGCGCGG AATTTGCCGG AGAACAGGTT
CCGCGTCTCA GAGATGCGCT GCAGCTCGCC CGCGAACTCG GTATCATCTA TCAGCTCGAA
CTGAAGATCT ACGACCGAAA TGACGTCTTG TTTCCGAAGC TGAAGACTCT GATCGATGAA
TTGGCCTGCG CAGACCTTCT GCAGTTTTCC TCGTTCGACT ACGTTCAGCT GAAAGCGGTG
AAAAAGGCAA TCCCTGATGT GCCGACCGTC GGTCTGATGC ATTCCCGACT GATCGATCCC
GCCGCGATTG CCCGTCAGGC CAATCTCGAT GCGATGAACA TCGAGATGTA TCATTTCGCC
AGCGGCGAGG CACACCAACT CCACGAAGAG GGTTTTGCCG TCTTCACCTA CCTGCCGGCT
CAGTATCACG AAAAGCTGAT GCAGTACGGC ACCGATATTG AAGCCCAGAT CGTCAAATGG
GTTCGCGAAG GCCAGCTGGA TCAGCTTCTC GGCGACGACG TGGCGCAGGT GACAAGGCTG
AGGGATATGG CCCGTGGCTG A
 
Protein sequence
MNPLRMTIET MLLGGHRGHS AGAPENTLAA FRKAFEYAGP LVTCETDLSI TSDGELVLMH 
DKTVDRTTNG RGIIQKMTYS EVSRLDAGSW FGAEFAGEQV PRLRDALQLA RELGIIYQLE
LKIYDRNDVL FPKLKTLIDE LACADLLQFS SFDYVQLKAV KKAIPDVPTV GLMHSRLIDP
AAIARQANLD AMNIEMYHFA SGEAHQLHEE GFAVFTYLPA QYHEKLMQYG TDIEAQIVKW
VREGQLDQLL GDDVAQVTRL RDMARG