Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2694 |
Symbol | accF |
ID | 7388357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2232990 |
End bp | 2233790 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643651758 |
Product | agrocinopine phosphodiesterase |
Protein accession | YP_002549945 |
Protein GI | 222148988 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCCGC TCAGAATGAC CATTGAGACG ATGCTCCTTG GCGGCCATCG CGGACATAGC GCCGGAGCGC CGGAAAACAC ACTTGCCGCG TTTCGAAAGG CTTTCGAATA TGCCGGCCCT CTTGTCACTT GCGAGACCGA TCTCAGCATC ACCAGCGATG GCGAACTGGT GCTGATGCAC GACAAGACGG TCGATCGGAC CACCAACGGC CGTGGCATCA TCCAGAAGAT GACTTATTCG GAAGTCTCCA GGCTGGACGC CGGAAGCTGG TTCGGCGCGG AATTTGCCGG AGAACAGGTT CCGCGTCTCA GAGATGCGCT GCAGCTCGCC CGCGAACTCG GTATCATCTA TCAGCTCGAA CTGAAGATCT ACGACCGAAA TGACGTCTTG TTTCCGAAGC TGAAGACTCT GATCGATGAA TTGGCCTGCG CAGACCTTCT GCAGTTTTCC TCGTTCGACT ACGTTCAGCT GAAAGCGGTG AAAAAGGCAA TCCCTGATGT GCCGACCGTC GGTCTGATGC ATTCCCGACT GATCGATCCC GCCGCGATTG CCCGTCAGGC CAATCTCGAT GCGATGAACA TCGAGATGTA TCATTTCGCC AGCGGCGAGG CACACCAACT CCACGAAGAG GGTTTTGCCG TCTTCACCTA CCTGCCGGCT CAGTATCACG AAAAGCTGAT GCAGTACGGC ACCGATATTG AAGCCCAGAT CGTCAAATGG GTTCGCGAAG GCCAGCTGGA TCAGCTTCTC GGCGACGACG TGGCGCAGGT GACAAGGCTG AGGGATATGG CCCGTGGCTG A
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Protein sequence | MNPLRMTIET MLLGGHRGHS AGAPENTLAA FRKAFEYAGP LVTCETDLSI TSDGELVLMH DKTVDRTTNG RGIIQKMTYS EVSRLDAGSW FGAEFAGEQV PRLRDALQLA RELGIIYQLE LKIYDRNDVL FPKLKTLIDE LACADLLQFS SFDYVQLKAV KKAIPDVPTV GLMHSRLIDP AAIARQANLD AMNIEMYHFA SGEAHQLHEE GFAVFTYLPA QYHEKLMQYG TDIEAQIVKW VREGQLDQLL GDDVAQVTRL RDMARG
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