Gene Avi_2678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2678 
Symbol 
ID7388346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2218170 
End bp2218502 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content53% 
IMG OID643651747 
Producthypothetical protein 
Protein accessionYP_002549934 
Protein GI222148977 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0428066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACGC AGACAGTTAC AGTTTCTAAA AATGCAGCCA AGCGTATCGC CAAAATCGTC 
TCCAGCGAAA ATGACAAGCA CGCTCTGCGC GTCTCTGTTG AAGGTGGCGG CTGTTCTGGC
TTTTCCTATA AATTCGACCT GGATCAAGGC CCGCAGGACG GCGATCTGGT GATTGAGCGC
GATGGCGCCA CGCTGCTGAT CGATCCGGTA TCATTGGTTT ATATGGCCGG GTCGGAAATT
GATTTTGTTG ATAACCTGAT GGGCCAGTCC TTCCAGATCA CCAATCCCAA TGCCGTCGCC
AGCTGCGGTT GTGGCACCAG CTTTGCCATG TAG
 
Protein sequence
MTTQTVTVSK NAAKRIAKIV SSENDKHALR VSVEGGGCSG FSYKFDLDQG PQDGDLVIER 
DGATLLIDPV SLVYMAGSEI DFVDNLMGQS FQITNPNAVA SCGCGTSFAM