Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2673 |
Symbol | |
ID | 7388342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2210995 |
End bp | 2212011 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643651743 |
Product | glycosyl hydrolase |
Protein accession | YP_002549930 |
Protein GI | 222148973 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCCACG CAAAAGCAAT GATTTTGGGC TGTTCCGGCC CGGTTCTAAC CCCCGATGAG CAGGCTTTCT TTAGAGAGCA TCAGCCCTGG GGCTTCATTC TGTTCGGGCG CAACTGCCTT GATGGTGCGC AGATCAGTAA TCTGGTTGCG CAGATGCGCG ATACGGTTGG CGGGCGCAAC GCGCCAGTGC TGATCGATCA GGAGGGTGGG CGCGTTCAGC GTATCCGCGA GCCGATGTGT CCGCGCTATC CATCGGGTGC CGAGATCGGC GCGCTTTACC GTCAGGACAA GGAGAAAGGG CTTCGCGCCG CCTGGCTGAT GTCGCGGCTG CATGCCTTTG ACCTTTTACG CTACGGCATC AATGTTGATT GTCTGCCAGT GGTGGACGTG CCAGTAGAAG GGGCCAGCAA TGTGATTGGC AACCGCGCCT ATGGTTTCGA TCCTGACACG GTTGGAGCGC TGGGCGAGGC GGCGGCGGCT GGATTGAAGG CGGGCGGTGT ACTGCCGACC GTCAAGCATA TTCCCGGCCA TGGCCGGGGC ATGGCTGATT CCCATCACGA ATTGCCAGTG GTGACGGCAT CGCGGGCCGA GTTGGAGGCG CATGATTTCC CGCCCTTCCG GCGTCTCAAC GGTGAATTGA TGGCTATGAC CGCGCATGTG GTCTATTCTG CCTATGACCC AGATTATACG GCCTCGACCT CATCCATTGT CGTGGATGAG GTGATCCGCG GACTGATCGG GTTCCAGGGG CTGCTGATGA ATGACGATCT CTCCATGAAT GCTCTGAAGG GGACGATTTC CGAGCGGGCA GCGGCGGTGG TTGCTGCTGG CAACGACGTT CTGCTGCATT GCCACGGCAT TATGGAGGAA ATGGTGCAGG TTGCGGCGCG CGCTCCGGTA TTGGCCGGAG CGGCGCTTGC GCGGGCAAAG GCTGTCGAGG CGGCCTTCGG CGGTAACGAC GGCGCCGATG AACAAGCGAT CCGTGAGGAG TTTGCCTCTC TGATGGCGGT GGCGTGA
|
Protein sequence | MTHAKAMILG CSGPVLTPDE QAFFREHQPW GFILFGRNCL DGAQISNLVA QMRDTVGGRN APVLIDQEGG RVQRIREPMC PRYPSGAEIG ALYRQDKEKG LRAAWLMSRL HAFDLLRYGI NVDCLPVVDV PVEGASNVIG NRAYGFDPDT VGALGEAAAA GLKAGGVLPT VKHIPGHGRG MADSHHELPV VTASRAELEA HDFPPFRRLN GELMAMTAHV VYSAYDPDYT ASTSSIVVDE VIRGLIGFQG LLMNDDLSMN ALKGTISERA AAVVAAGNDV LLHCHGIMEE MVQVAARAPV LAGAALARAK AVEAAFGGND GADEQAIREE FASLMAVA
|
| |