| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2662 |
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| Symbol | |
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| ID | 7386654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2202380 |
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| End bp | 2203996 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643651734 |
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| Product | lipoprotein |
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| Protein accession | YP_002549921 |
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| Protein GI | 222148964 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0792091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCAGA GTCAGTCTTA TAAATCCGGC ATGCCTGTTG CCCAGATTCT CTGGGTTGGC
CTGATGGCAA GCGTCGCAAC TGGTTGCAGT TCCGATTCGA GCCGCTTTTC CGGCCTGTTT
TCCAAAACCG ATTCGATGAC GACCGCCTCG ACGGGCGGCC AGATCACTGG AATGGCTAAT
GCACCGGTGC CCCAGACGGA TGTCGATGGC GGCGGCTCTT ATGCTCCAGC GGCCTCCGGC
GGATCGATGG GTGGCGGTGG TTATGGCAAT CGTCAGCAGG CGATGACGCA GCCCTATCCG
GCCCAGCAGA CCTATTCGCC AGCACGGCGT GCCTCCTCGG CTGTGTCTGT TCAGAAGGCC
GAGCTTGCAC CGCCGTCCGG TTCCACCGCG TCGACAGGCC CGATCTCTTC GCGCCGCCAG
ACGGCCTCGG CCCAGCCATT CCCGGCGGCT ACTCACCAGT CGGCTGCACT GGAAGACGGC
GACGGCTTGT CCACCAACAC CCTTCCGCAG CCGGCAAAGC CCGGCCTGCC ATCTGGCCAA
GGCGCTGGTG CCAATGGCCA AGGTGCCAAT GGTTGGAGCA CGGTCAATGC ACCCCGCGTT
GTGCTGAAGC CGGGCGAAAG CCTGGCCACC TTGTCACAGC GTTACGGCGT GCCGGAAAAG
GAAATCGTCA AGGCCAATGG TCTTTCGACG GCAGGGGCTG CGCGTCCCGG TCAGTCCATC
CTCATTCCGA CCTTCGGTTC GCGCAATACG CCGACCAGGG CTGCGGCTGC CGAAGGCACG
CTGTTGCCTC CAGGTCAGTC TCCCGGACCG ACGCCGCGCC AGGAAGAAAA GGTCGCTGTA
TTGCCGACCA ATCCGAAGCT GCGCGATAAG GTCAAGACCG ATATTGCCGC AAACAACACC
ACCAATGCCG CGGGCACCGG CAAGACGCCG CCTGCCGCTG GCACCTATGT GGTCAAGTCA
GGCGACTCGA TTGCCAAGAT TGCCCGCGAA AACGGTGTTT CCGTTGCGGC CCTCAAGCAG
GCGAACCATC TCGGCACCCA GGGTGTCCGC GTTGGCCAGA CGCTGGAACT GCCGCAGGCC
GATCAAAAGC TGGCCGCGAC ACCTGTCAGC ACGGCGCCTG CCAATACCAA GCCTGAAGCG
CCGAAGGTGA CTGCTGCGGC TCCGGCGCCT GCCGCGCCGA CCAAGTCGGT CACCGATGTT
GCCTCCGCCG ATCCAGGCGA CAAGGCCCCG GATGCAACTG GCATCGGCAA ATACCGCTGG
CCGGTGCGTG GCGCGGTGGT GGCTCCGTTT GGTGCCAATG TCGCTGGCAA GCGCAATGAC
GGTATCGATA TTTCCGTGCC GACGGGTACG CCGATCAAGG CTGCTGAAAA CGGCGTGGTC
ATCTATGCCG GCAATGGTCT GAAAGAACTC GGCAACACCG TGCTTGTGCG CCATGACGAC
GGCACTGTGA CTGTTTACGG CCATGCCGAT GCCATTTCCG TTCAGCGCGG CCAGAAGGTG
CAGCGTGGCC AGCAAGTGGC AACCTCGGGT ATGAGCGGCA ATGCCAGCCA GCCGACCCTG
CATTTCGAAG TGCGCAAGGA TGCGACGCCG GTCAACCCGA TGGGCTTCCT GGAATAG
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| Protein sequence | MRQSQSYKSG MPVAQILWVG LMASVATGCS SDSSRFSGLF SKTDSMTTAS TGGQITGMAN
APVPQTDVDG GGSYAPAASG GSMGGGGYGN RQQAMTQPYP AQQTYSPARR ASSAVSVQKA
ELAPPSGSTA STGPISSRRQ TASAQPFPAA THQSAALEDG DGLSTNTLPQ PAKPGLPSGQ
GAGANGQGAN GWSTVNAPRV VLKPGESLAT LSQRYGVPEK EIVKANGLST AGAARPGQSI
LIPTFGSRNT PTRAAAAEGT LLPPGQSPGP TPRQEEKVAV LPTNPKLRDK VKTDIAANNT
TNAAGTGKTP PAAGTYVVKS GDSIAKIARE NGVSVAALKQ ANHLGTQGVR VGQTLELPQA
DQKLAATPVS TAPANTKPEA PKVTAAAPAP AAPTKSVTDV ASADPGDKAP DATGIGKYRW
PVRGAVVAPF GANVAGKRND GIDISVPTGT PIKAAENGVV IYAGNGLKEL GNTVLVRHDD
GTVTVYGHAD AISVQRGQKV QRGQQVATSG MSGNASQPTL HFEVRKDATP VNPMGFLE
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