Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2647 |
Symbol | cobN |
ID | 7386641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2187063 |
End bp | 2190845 |
Gene Length | 3783 bp |
Protein Length | 1260 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643651721 |
Product | cobaltochelatase CobN subunit |
Protein accession | YP_002549908 |
Protein GI | 222148951 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.844431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCTTC TGCTTGCCCA GCAAGGCTCG ATCAGCGACG GGGATGACGC GATAGACCTT GGCCAGACGC CGGGGGATAT CCTGTTTCTG TCCGCCGCCG ATACCGAGCT GTCCGCCATC GCGGCGGCGC TGGCGCGGCA ATCCGAGACC GCGACATGGC GGCTCGCCAG CCTGATGGCG CTGAAACATC CGATGTCGGT CGATACCTAT ATCGAGCGCA CCGCCCGCCA TGCGAAACTG ATTGTGGTCA AGGCTTTGGG TGGGGCCAGC TATTTTCATT ATGCGCTGGA AGCGCTGCAC GCCTGCGCCC GCCGCCATGG GATCAAAATT GCCGTCCTGC CCGGCGACGA CAAGCCGGAT GCCGGGCTGG AGGCTTTTTC AAACCTGGAT GCCTCGGATC TATCGGCGCT TTGGGCCTAT CTGATCGAAG GCGGCGATAG TAATGCCAGC CATTTCGTGG CTTTTGCGCA AGCGCTGCTG ACCAATGCAC CGAAACCGCA GGAGGCTTTG CCGCTGCTGA AAGCCGGGCT GTGGTGGCCA GGGCGAGGGG CGATCGACGT TCCGGCATGG CAGGCGCTTG CAGGTGAGGG GCCGATTGCT GCCCTGTGCT TTTACCGCGC CCTCGTCCAG AGCGGCGAGA CCGCGCCGGT TGAGGCGATG ATCGAGGCGT TGCAAGCGCA GGGCCTGCGG GTCTTGCCGG TGTTTGTCGC CAGTCTGAAA GATGCTGTCT GCGTTGAGAC GCTGCGGATG ATTTTTAAGC AGGCCGCACC GGATGTGGCG GTCAACACGA CAGGCTTTGC CGTGTCCGTT CCGGGTGCCG ATGCGCCCTC GACCGTGCTG GACGAGCACG GCGCGGTGGT GTTGCAGGCG CTGTTTTCCT CGTCGCCACG CTCCGTCTGG GAAGCCTCGA TGCAAGGGCT GAGCGCCCGC GATCTCGCCA TGAATGTCGC GCTGCCGGAG GTGGACGGGC GGGTGCTGAC CCGCGCCGTG TCCTTCAAAT CCGCTGCCCG CTACGATGCG CGGGTGGAAA CCACACTGGT CAGCCATGCG CCGGACCCGG GCCGCATGGC CTTCGTCGCC AGCCTGGCTG CCAATTGGGC GCGGCTGAGG CACACACCTG CGCCAGAACG GCAGGTCGCC CTGATCGTGG CCAACTATCC CAACCGGGAT GGGCGCCTTG GCAATGGTGT CGGGCTGGAT ACCCCTGCCG CCAGCCTTGA AGTGTTGAAG GCCCTCAAAG CCGAGGGCTA CGACACCGGC ATCCTGCCCG CCAACTCTGA TGCGCTGATG ACGACACTGA TGGCAGGTGT CACCAATGCA GCGGTGAAGG GCAGGGTGAT CCGCGAGACC CTGCCACTTG CCGATTACCA GCGGTTTTTC GGGAGCCTGC CTGACAAGAT CAGGCGGGAG ATTAGCGACA GATGGGGGGA GCCGCAGGCC GATCCGTTTT TTGCCGGGGA TGGTTTCGCG CTGCCGCTGC TGCGGTTTGG CAAGGTGATG GTCGGCATTC AGCCAGCGCG GGGCTATAAT ATCGATCCGA AGGACAGCTA TCATTCGCCG GATCTGGTGC CGCCCCACGG CTATTTCGCC TTCTACGCAT TTCTCCGCCA GAGATTTGGC GTTCACGCCA TCATTCATAT GGGCAAGCAC GGCAATCTGG AATGGTTGCC GGGCAAGGCA CTGGCGCTGA GCGAGAGCTG TTATCCCGAA GCGGTGCTGG GTCCGGTGCC GCATCTCTAT CCCTTCATCG TCAACGATCC CGGTGAGGGT ACGCAGGCCA AGCGCCGGGC GAGCGCCGTC ATTATCGACC ATCTGACCCC GCCGCTGACT AGGGCGGAAA GTTATGGCTC GCTGAAGGAT CTGGAAGCGC TGGTCGATGA ATATTACCAG GCGATGGGCG GTGATCCGCG CCGGGTTACC CTGTTGAAAA CCCAGATCCT CGATCTGGTC GCCGATATCG GTCTGGATGA GGATGCAGGT ATTGCCGGTG GTGAGGCGGA GGAGGTCAAG CTGACCAAGC TCGACGCCTA TCTCTGCGAC CTCAAGGAAA TGCAGATCCG CGACGGCCTG CATATTTTCG GGCAGGCACC GCAAGGCCGG TTGCTGACCG ATCTGGTCGT GGCCTTGGCG CGGGTGCCGC GTGGACAAGG GCAGAGCCAA GGGGGCCAGG GCGGCGATGC CAGTCTGCAC CGGGCGATTG CTGCCGATGC GCTTGGCGGT TGGGCCGATT TCGACCCTCT GGACTGTGTG TTTTCCGATA TATGGGACGG GCCGCAGCCG GAACTTCTGA GAAACCTGAC GCAAGCCCCC TGGCGCACCA AGGGCGATAC GGTCGAGCGG ATCGAATTGC TGGCCGCAGA CATGGTGTCG TGCAGGTTTG CCTGTCCCCA AGGCTGGCAA AACACAAGCG CTGTTCTGGA TGAGGTTGAA GCCCGGCTGA AACCGAGCGT GATCAAATCC GGCCCAGCGG AAATCGCCGG ACTGCTCAAA GGACTGTCTG GCCGCTTCGT CGCTCCCGGT CCGTCCGGTG CGCCGACGCG GGGACGACCG GATGTGCTAC CGACGGGGCG TAATTTCTAC TCCGTCGATA GCCGCGCCGT GCCGACGCCT GCCGCTTACC AACTCGGCCA GAAATCCGCC GAACTGCTGG TTGCCCGCTA TGTGCAGGAC CATGGCGAAT GGCCGGTATC GTTTGGCATT ACCGCCTGGG GTACCAGCAA TATGCGCACG GGCGGCGATG ATATTGCCCA GGCGCTGGCG CTGATCGGCG TCAAGCCGCT CTGGGACAGC GCCTCGCGCC GGGTGACCGG CTATGAGATC ATTCCCCAGG CGATTTTGGG TCGCCCGCGC GTTGACGTGA CACTTCGGAT TTCAGGGTTT TTCCGCGATG CCTTTCCTGA GCAGATCGCC TTGTTCGACA AGGCGGTGCG GGCGGTTGGC GCTCTGGATG AGGACGCGGC GGATAACCCG ATTGCAGCGC GCATCAAGGC TGAAACAGTC TTGTTCCAGC AACAGGGGCT GGACGAAAAG ACCGCCAGCC GCCGGGCGGG CTACCGGGTG TTCGGGTCGA AACCCGGCGC TTACGGCGCG GGGCTGCAAG CCTTGATCGA TGAAAAGGGC TGGGAGCGCC GGGCCGATCT GGCCGAGGCC TATCTGGTCT GGGGCGCTTA CGCTTACGGC GCGGGCGAAG AAGGCAGGGC CGAGCGCGGC CTGTTCGAAG AGCGCTTGCA GGGCGTGCAG GCCGTGGTGC AAAACCAGGA CAATCGCGAG CATGATCTGC TGGATAGCGA CGATTACTAT CAATTCGAGG GCGGCATGAC GGCAGCGGTC GAGCAGCTCG CGGGTCGCAG GCCAACCGTC TATCACAACG ACCATTCCCG ACCGGAAAAG CCTGTGATCC GTACGCTGGA GGAAGAGATT GGCCGGGTGG TACGCGCCCG CGTCGTCAAT CCGAAATGGA TCGAAGGCGT GATGCGTCAC GGCTATAAGG GCGCGTTCGA AATTGCCGCC TCCGTGGATT ATCTGTTCGC CTTTGCCGCC ACCACCGGCG CCGTGCGCCA GCCGCATTTC GAAGCCGTCT ACCGGGCTTT TATTGGCGAT GACCGGGTGC GGGCTTTCAT GGCCGATAAA AACCCGGCTG CCTTGAAGGA CATGTCGCAG CGGTTGTTGG AATCCATCGA CCGTGGCCTC TGGACGCCGC GCAGCAATTC GGCGAGATAT CATCTGTCCC AACTTTCCCA AGCCGAGCTT TTACAGACGA TTGAATTGGA GAATGCCCTA TGA
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Protein sequence | MHLLLAQQGS ISDGDDAIDL GQTPGDILFL SAADTELSAI AAALARQSET ATWRLASLMA LKHPMSVDTY IERTARHAKL IVVKALGGAS YFHYALEALH ACARRHGIKI AVLPGDDKPD AGLEAFSNLD ASDLSALWAY LIEGGDSNAS HFVAFAQALL TNAPKPQEAL PLLKAGLWWP GRGAIDVPAW QALAGEGPIA ALCFYRALVQ SGETAPVEAM IEALQAQGLR VLPVFVASLK DAVCVETLRM IFKQAAPDVA VNTTGFAVSV PGADAPSTVL DEHGAVVLQA LFSSSPRSVW EASMQGLSAR DLAMNVALPE VDGRVLTRAV SFKSAARYDA RVETTLVSHA PDPGRMAFVA SLAANWARLR HTPAPERQVA LIVANYPNRD GRLGNGVGLD TPAASLEVLK ALKAEGYDTG ILPANSDALM TTLMAGVTNA AVKGRVIRET LPLADYQRFF GSLPDKIRRE ISDRWGEPQA DPFFAGDGFA LPLLRFGKVM VGIQPARGYN IDPKDSYHSP DLVPPHGYFA FYAFLRQRFG VHAIIHMGKH GNLEWLPGKA LALSESCYPE AVLGPVPHLY PFIVNDPGEG TQAKRRASAV IIDHLTPPLT RAESYGSLKD LEALVDEYYQ AMGGDPRRVT LLKTQILDLV ADIGLDEDAG IAGGEAEEVK LTKLDAYLCD LKEMQIRDGL HIFGQAPQGR LLTDLVVALA RVPRGQGQSQ GGQGGDASLH RAIAADALGG WADFDPLDCV FSDIWDGPQP ELLRNLTQAP WRTKGDTVER IELLAADMVS CRFACPQGWQ NTSAVLDEVE ARLKPSVIKS GPAEIAGLLK GLSGRFVAPG PSGAPTRGRP DVLPTGRNFY SVDSRAVPTP AAYQLGQKSA ELLVARYVQD HGEWPVSFGI TAWGTSNMRT GGDDIAQALA LIGVKPLWDS ASRRVTGYEI IPQAILGRPR VDVTLRISGF FRDAFPEQIA LFDKAVRAVG ALDEDAADNP IAARIKAETV LFQQQGLDEK TASRRAGYRV FGSKPGAYGA GLQALIDEKG WERRADLAEA YLVWGAYAYG AGEEGRAERG LFEERLQGVQ AVVQNQDNRE HDLLDSDDYY QFEGGMTAAV EQLAGRRPTV YHNDHSRPEK PVIRTLEEEI GRVVRARVVN PKWIEGVMRH GYKGAFEIAA SVDYLFAFAA TTGAVRQPHF EAVYRAFIGD DRVRAFMADK NPAALKDMSQ RLLESIDRGL WTPRSNSARY HLSQLSQAEL LQTIELENAL
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