| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2641 |
|---|
| Symbol | |
|---|
| ID | 7386636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 2183322 |
|---|
| End bp | 2184653 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643651716 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002549903 |
|---|
| Protein GI | 222148946 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2138] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.597647 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAA AACTCGGAAT CATGGTCTGT GGACATGGCA GCCGCAACCA GAATGCGGCG
CGCGAATTCG CTGTCATCGC TGAAGGGCTG AAGGCGCGCA ATCCCGACCT GCCGGTCGAA
TACGGCTATC TGGAATTCTG CAATCCGGTG ATTTCGGCAG GTCTCGACAG CTTGCGGGAA
AAGGGCGTCA CCCGCGTCTT AGCCGTGCCG GGCATGCTGT TTGCTGCGGG CCATGCCAAG
AACGATATTC CCTCCGTGCT GAATACCTAT CAGGCGCAGA ACCCCGGCAT GGTGATCAAC
TATGGGCGCG AGCTTGGTAT TGACCTGAAG ATGATCCGTG CTGCCGGTGA CCGCATCCAG
GCAGCAGTAG ATGAGGCGAA TGAGCAACTG GGTTTTGTCG ATAAGCATGA CACGCTGCTG
ATGGTGGTCG GGCGCGGCTC CTCTGATCCC GATGCCAATT CCAACGCCAC CAAGGTGATG
CGGATGCTGT GGGAAGGAAT GGGCTTTGGC TGGGGCGAAA CCTGTTATTC CGGTGTGACC
TTTCCGCTGG TGGAGCCGGG CCTGACCCAT GCTGCCAAGC TGGGTTACAA ACGCATTATC
GTCTTCCCCT ATTTCCTGTT TACCGGCGTG CTGGTGAAGA GGATCTACAG CTATACCGAT
GAGGTGGCAG CCCGCCACCC GGATATCCAG TTCGTCAAGG CCAGCTATCT CAACGACCAT
CCGCTGGTGC TGGATGCCTT TCAGGATCGG GTGCGCGAAA TCCTCGAAGG GGCGGCGGTG
ATGAACTGCC AGATGTGCAA ATACCGCGAA CAGGTTTTAG GCTTCGAGGC CGATATCGGC
CAGCCGCAGG AAAGCCACCA CCACCATGTC GAGGGCATTG GCGGCGGGCT GGAAGACTGT
CCGTGCAAGG GCGATTGCGA CGCCTCCTGC CGCGATCAGG CGTTCTGTCT TAAACATGGC
CTGCCGTGGA CGCCGGTGCA TAGCCATGCC GATCCGGCTC CGCTGCAACC CGCCTTCGAC
TATGGCGCAT CGACAACGCT TGGCGGCAAA TACGGGCATT TGCTGAATGC CAGCCCAGAT
GCGGGACTGG AAGCGGTGAT GAATGCGCCG TCCAGCGGTA AGGCGCATGT CCACGAACAC
GGGCCGGATT GCGGCTGTGG TCATGATCAT AGCCACGACC ACCATGGACA TGAGCACCAT
GACCACACAC ATGACCACGG GGATCACTCA CACGGTCATA ACCACCATCA TGACCACGGG
CATAGCCATA CCCACGCGCC TTACCCCCAT GCGGATCATC CGCTGGGTCC GAAATCCATG
AAGAAGACCT GA
|
|---|
| Protein sequence | MAEKLGIMVC GHGSRNQNAA REFAVIAEGL KARNPDLPVE YGYLEFCNPV ISAGLDSLRE
KGVTRVLAVP GMLFAAGHAK NDIPSVLNTY QAQNPGMVIN YGRELGIDLK MIRAAGDRIQ
AAVDEANEQL GFVDKHDTLL MVVGRGSSDP DANSNATKVM RMLWEGMGFG WGETCYSGVT
FPLVEPGLTH AAKLGYKRII VFPYFLFTGV LVKRIYSYTD EVAARHPDIQ FVKASYLNDH
PLVLDAFQDR VREILEGAAV MNCQMCKYRE QVLGFEADIG QPQESHHHHV EGIGGGLEDC
PCKGDCDASC RDQAFCLKHG LPWTPVHSHA DPAPLQPAFD YGASTTLGGK YGHLLNASPD
AGLEAVMNAP SSGKAHVHEH GPDCGCGHDH SHDHHGHEHH DHTHDHGDHS HGHNHHHDHG
HSHTHAPYPH ADHPLGPKSM KKT
|
|---|
| |