Gene Avi_2628 details

Gene Information

• Locus tag: Avi_2628
• Symbol: cobK
• ID: 7386627
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 2173720
• End bp: 2174409
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643651707
• Product: cobalt-precorrin-6x reductase
• Protein accession: YP_002549894
• Protein GI: 222148937
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG2099] Precorrin-6x reductase
• TIGRFAM ID: [TIGR00715] precorrin-6x reductase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.246451
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCCATCGC CTCCTGAACG CATCCTCATT CTCGGCGGCA CAGCAGAGGC GGCAAAACTT 
GCCGCAGAGT TGGTGGAGCA AGGTGAGGCT TTCGTCATTA CCGCGCTTGC CGGACGCACC 
GAATATCCGG CCAGTCTGGC TGGAGACGTC CGCATCGGTG GCTTCGGCGG TGTCGATGGG 
CTGGTGGCCT ATCTGAGGAG TGAAGGCATT ACCAGGGTGA TCGACGCCAC ACATCCATTT 
GCCCGGCAAA TATCCGCCAA TGCTGTCGAA GCCTGCCGAA AGGCGGACAT ACCGCTCATC 
GTCCATCTGC GCCCGCAATG GCTGGAGCAA CCCGGCGACC GCTGGAGCAT GGTCGAAACA 
CTGGAAGCGG CGGCCCATAC GTTGCCGGAG GGAGCCAAGG TCTTCCTGGC GCTGGGGCGG 
CAATATATCG ACATATTTGC GCGGCGAACG GATTGCCACT TTGTGATCCG CATGGTGGAT 
GCGCCATCAG CGCCGCTACC CTTTACCCAT GCCGACATCG TTGTCGGCAA AGCGGCGGCG 
GATTGGGAAG CAGAAAAAGC CCTGCTGGAA AGCCATGCCA TCACCCATCT CGTGACCCGC 
AATTCAGGCG GCGAGGCTAG CTATGGCAAG ATTATCGCGG CCCGAAAATT GGGATTGCCC 
GTGGTGATGA TCGCCCGCCC GATCACTTGA 

 

Protein sequence

MPSPPERILI LGGTAEAAKL AAELVEQGEA FVITALAGRT EYPASLAGDV RIGGFGGVDG 
LVAYLRSEGI TRVIDATHPF ARQISANAVE ACRKADIPLI VHLRPQWLEQ PGDRWSMVET 
LEAAAHTLPE GAKVFLALGR QYIDIFARRT DCHFVIRMVD APSAPLPFTH ADIVVGKAAA 
DWEAEKALLE SHAITHLVTR NSGGEASYGK IIAARKLGLP VVMIARPIT