| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2612 |
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| Symbol | sdaA |
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| ID | 7386616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2161953 |
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| End bp | 2163356 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643651696 |
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| Product | L-serine dehydratase |
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| Protein accession | YP_002549883 |
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| Protein GI | 222148926 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0138144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCTTT CCGTCTTCGA CGTTTTCAAG ATCGGCATCG GGCCATCCAG CTCGCACACG
ATGGGGCCGA TGTCGGCAGC AGGCCGGTTT CTTGATCTGA TCCTCTCCAA TGACTGGCCG
CGCCCGGCTG GCGCCGAGGT CGCGGCACTG AAGGTTAGCC TGCACGGTTC GCTGGCCTAT
ACAGGCGTTG GTCATGGCAC CGACCGCGCT GTTATCATCG GCCTGACCGG CGAGATGCCC
GACAGGGTCG ATCCCGACAG GATGGCGGAG CTTGTCGCCG AGGTGCAGCG CAGCGGCAAG
GTCTGTCCCG CCGGGCATCC GGCCTATCAG TTCAATCCGG CGACCGATCT GGTGCTGGAC
AAGAAGACGC CGCTGGCAGG TCACGCCAAT GGCATGCGAT TTTCGGCCTT TGACAAGCAG
GGTCGCCTGC TGCTGACAAC CGTCTATTAT TCCATCGGTG GCGGCTTCGT GGTGACCGAC
ATCGAGCTTG CTGCCGTGCA GAAGACGAAG AAGACAGAAA CTCACGCCGT CAAAGTGCCT
TATCCTTTCG CCTCCGCCCG GCAGATGCTG GCAATGGCAG CGTCATCCGG GCTGACGATT
GCCCAGATGA AGCGCGCCAA TGAGGAAGTC TCCTTGAGTC GCGAGGCGCT GGACGAAGGC
CTCGACCGGC TTTGGACGGC GATGAGCGGC TGTATTGATC GTGGCTTGCG GGGTGAGGGC
GAACTGCCCG GCGGGTTGAA AGTCAAGCGC CGCGCCCGTT ACATCCATGA CAAGCTCCAG
GAAGAATGGC GCTCCAACCG GCAAAACCCG CTGCTGGCCA ATGACTGGCT CTCGGTCTAT
GCCATGGCTG TCAACGAAGA AAATGCCGCT GGCGGCAGGG TGGTGACGGC GCCGACCAAT
GGGGCAGCAG GCGTCGTGCC TGCAACGATC CGCTATTACC TGCATTTTCA TCCCGATGCC
GATCAGCAGG GGGTGCGTGA TTATCTGCTG ACGGCTGCGG CCATTGGCGG CATTATCAAG
CACAATGCCT CGATTTCCGG TGCCGAAGTC GGCTGCCAGG GCGAGGTGGG TTCGGCAGCG
GCCATGGCTG CGGCAGGATT GGCAGCGGTG ATGGGCGGCA GCCCGGAGCA GATCGAAAAT
GCCGCCGAGA TTGCGCTCGA ACATCATCTC GGCATGACCT GCGATCCCGT GGCGGGTCTG
GTACAGGTAC CCTGTATCGA GCGCAATGCG CTGGGTGCCG TCAAAGCGGT GACGGCGGCC
TCGCTGGCCA TCAAGGGGGA TGGTAGCCAT TTCGTACCGC TAGATGCCTG TATCGAGACG
ATGCGCCAGA CAGGCAATGA CATGAGTGAG AAATATAAAG AGACCTCGCT TGGTGGCCTG
GCCGTCAATG TCGTGGAATG TTAA
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| Protein sequence | MFLSVFDVFK IGIGPSSSHT MGPMSAAGRF LDLILSNDWP RPAGAEVAAL KVSLHGSLAY
TGVGHGTDRA VIIGLTGEMP DRVDPDRMAE LVAEVQRSGK VCPAGHPAYQ FNPATDLVLD
KKTPLAGHAN GMRFSAFDKQ GRLLLTTVYY SIGGGFVVTD IELAAVQKTK KTETHAVKVP
YPFASARQML AMAASSGLTI AQMKRANEEV SLSREALDEG LDRLWTAMSG CIDRGLRGEG
ELPGGLKVKR RARYIHDKLQ EEWRSNRQNP LLANDWLSVY AMAVNEENAA GGRVVTAPTN
GAAGVVPATI RYYLHFHPDA DQQGVRDYLL TAAAIGGIIK HNASISGAEV GCQGEVGSAA
AMAAAGLAAV MGGSPEQIEN AAEIALEHHL GMTCDPVAGL VQVPCIERNA LGAVKAVTAA
SLAIKGDGSH FVPLDACIET MRQTGNDMSE KYKETSLGGL AVNVVEC
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