Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2605 |
Symbol | |
ID | 7386611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2155221 |
End bp | 2156060 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643651690 |
Product | hypothetical protein |
Protein accession | YP_002549878 |
Protein GI | 222148921 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.490664 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTACA AGACAATTCT GAGCGTTCTC GACAACCGCC GTACGGCAGC GCAGGTTTCT GATTTTTCCA TTGCGCTGGC CGAACAGTTC GGTTCCCATG TCATCGGCGT TCATTGCGAA GCGGTGGCCG GCATGCCCCT GATCGCGCCG ATGGAAATAC CCGATCCGGT CGCGGTACAG GCCATGCAGG ATCTGGCCCA TAAGGAAACC GGGGCCATTG AGGCAATCTT CGCCGAGGTG GCGCGGCGCG AAGGCGTGTC GACCGAATGG CGCAATTTCG TGACCTCCGT CGGTTCGACA GGTTCGTTTG TTGACAGCGC CCGCTGCGCC GATCTGGTCG TGGCGGCCCA GGGAGAAAGC GGTTCGCTTT CGGATAACCG CAGCGAATTG GAAACGGCGT TGTTTGATAG CGGCAGGCCC GTGCTTCTCG TGCCTTACAT CCTGAAGACG CCGCGGCCTA TCAAGCGGGT GCTGATTGCC TGGAACGGGT CGCGTGAAGT GGCACGCGCC ACATTCGATG CCCTCCCTTT CCTGAAACAG GCTGAAAGCG TTGAAATCTT CTCGGTGGTC GATAGCAGCG GTGACGATCT TTCACGCAGC CTGCCCGGCG CCGAAATTGC CGCGACGCTG AGCCGCCACG ATATCAATGT CACCGTGACC CAGCAGGATC AGGAGCAATT GAAGGCGGCG GCGCATATCG AAAACCGCTT GTCCGACCAG AGCATCGATC TGTTGGTGAT GGGAGCCTAT TCCCATAAAC GCTGGTGGGA AGTGCTGTTC GGTGGCGTGA CCCGCACCGT GCTTGATTCC ATGACGGCCC TGACATTGCT TTCGCGCTGA
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Protein sequence | MAYKTILSVL DNRRTAAQVS DFSIALAEQF GSHVIGVHCE AVAGMPLIAP MEIPDPVAVQ AMQDLAHKET GAIEAIFAEV ARREGVSTEW RNFVTSVGST GSFVDSARCA DLVVAAQGES GSLSDNRSEL ETALFDSGRP VLLVPYILKT PRPIKRVLIA WNGSREVARA TFDALPFLKQ AESVEIFSVV DSSGDDLSRS LPGAEIAATL SRHDINVTVT QQDQEQLKAA AHIENRLSDQ SIDLLVMGAY SHKRWWEVLF GGVTRTVLDS MTALTLLSR
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