| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2590 |
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| Symbol | |
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| ID | 7386600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2139821 |
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| End bp | 2140834 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651679 |
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| Product | transcriptional regulator AraC family |
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| Protein accession | YP_002549867 |
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| Protein GI | 222148910 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAA CGCCTGTTAA AAAACGCAAT ATCGTCTTTT TTCTTGTCCC GAATTTCACG
CTATTGCCGT TTGCGGGCGC CATCGAAACA TTGCGCATTG CCAACAGGAT GCTGGGCTAT
GCGGCTTATG AGTGGCGGCT CTGTTCAGTC GACGGCAACA AGGTGTCGTC TTCATCGGGC
ATCAGCATCG AGGTCGATTC GTCGCTTGCC GATGAGCGCC GTTTCCTGGC CGGTGAAAAC
CGGCCCAATA TGGCGATTGT CTGTTCCGGC GTCTTTGTCG AAGAGTTTAA CAACAAATCC
GTCAACGCCT GGCTGCGAGA AGCCTATAAC CGCAACGTCG CGGTCGGCAG CCTTTGCACC
GGCGCCCATG TGCTGGCCCA GGCCGGACTT TTGAACGGCA AGCGCTGCGC GATCCACTGG
GAAAACCTGC CCGGATTTTC GGAAGCCTTC CCCCAGGCCG AAGTCTATGC CGATCTCTAT
GAAGTCGACA GCAATCTCTA CACCTGCGCG GGCGGTACAG CTTCGCTTGA CATGATGCTC
AACCTGATTG GCCAGGATTT TGGCGAGGGC CTCGTCAACC GGGTCTGTGA ACAACATCTG
ACCGACCGGG TTCGGGCTGC CGGAGACCGC CAGCGCCTCC CGCTGCGCGC CCGCCTTGGC
GTGCAGAACA ACAAGGTCTT GCAGATCATC GAATTGATGG AAGCAAGCCT GGCCGAGCCC
TTGTCCCTGC TTGATATCGC CGACAAGGTG GATCTGTCAC GCCGCCAGAT CGAACGGTTG
TTCCGCCAGG AAATGGGCCG CTCACCGGCG CGCTATTATC TGGAAATCCG CCTTGACCGT
GCCCGGCATC TGCTGGTGCA ATCCTCGATG CCGGTGGTGG AAGTCGCCGT CGCCTGCGGC
TTTGTCTCCG CCTCGCATTT TTCCAAATGC TACCGCGAAT TCTACAATCG CTCGCCCCAG
CAGGAACGCG CCGAACGCAA ACTGGCAACG GCAAAAGCGG CGGTTGCCGC ATAA
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| Protein sequence | MSKTPVKKRN IVFFLVPNFT LLPFAGAIET LRIANRMLGY AAYEWRLCSV DGNKVSSSSG
ISIEVDSSLA DERRFLAGEN RPNMAIVCSG VFVEEFNNKS VNAWLREAYN RNVAVGSLCT
GAHVLAQAGL LNGKRCAIHW ENLPGFSEAF PQAEVYADLY EVDSNLYTCA GGTASLDMML
NLIGQDFGEG LVNRVCEQHL TDRVRAAGDR QRLPLRARLG VQNNKVLQII ELMEASLAEP
LSLLDIADKV DLSRRQIERL FRQEMGRSPA RYYLEIRLDR ARHLLVQSSM PVVEVAVACG
FVSASHFSKC YREFYNRSPQ QERAERKLAT AKAAVAA
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