Gene Avi_2570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2570 
Symbol 
ID7386586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2124646 
End bp2125329 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content60% 
IMG OID643651665 
Producthypothetical protein 
Protein accessionYP_002549853 
Protein GI222148896 
COG category[I] Lipid transport and metabolism 
COG ID[COG0671] Membrane-associated phospholipid phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.484393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGCGCAACC GGATCGAGCC GCGCCTTCTC GCCAGTCTGA CCGTATTGGC CGGTCTTGGG 
TTGCTGTTTG CAAAAATCGC AGAAGACGTC TTCGATCAGG AAAGCCATGC CTTCGATCGG
GCCATATTGC TGGCGCTCCG GATCAAAGAC GATCCCGGCT TGACAATCGG CCCGCCCTGG
CTGGTCAATT CAGTGCGCGA CATTACCAGT CTTGGCGGCT TCACGGTGAT TACCCTCGTT
ACCGTGCTGA CGGTGTTCTA TCTGCTTGCG GCGGGCAAAA CCCGCAATGC CATGATTGTC
GGCTTGGCGA TTTCGCTCGG AGCCTTAGCC GAATCCGGCC TTAAACTGCT GTTTTCGCGC
GCCCGGCCCG ATGTCGTGCC GCATCTGGTC ACAGTGCAGA CTATGAGCTT TCCAAGCGGC
CATGCCATGA TGTCGGCCAT TACCTATCTG ACGCTGGGCG CCATGCTGGC CCGCGCTCAG
CCGACATGGC AATTGCGCTA TTTCACCTTT GGTGCTGGCC TGTTCCTGAC GCTGCTGATC
GGGGTTAGCC GGGTGTTTCT CGGCGTGCAT TGGCCAACGG ATATCATCGC GGGCTGGACG
GTCGGCGGTG CCTGGGCGCT GTGCGTCTGG ATGATAGCCG ATGCGTTGAA CCGCCGCCGC
ACACCACTTG AACCTGAACA GTGA
 
Protein sequence
MRNRIEPRLL ASLTVLAGLG LLFAKIAEDV FDQESHAFDR AILLALRIKD DPGLTIGPPW 
LVNSVRDITS LGGFTVITLV TVLTVFYLLA AGKTRNAMIV GLAISLGALA ESGLKLLFSR
ARPDVVPHLV TVQTMSFPSG HAMMSAITYL TLGAMLARAQ PTWQLRYFTF GAGLFLTLLI
GVSRVFLGVH WPTDIIAGWT VGGAWALCVW MIADALNRRR TPLEPEQ