| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2567 |
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| Symbol | trpC |
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| ID | 7386583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2122036 |
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| End bp | 2122851 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651662 |
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| Product | indole-3-glycerol-phosphate synthase |
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| Protein accession | YP_002549850 |
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| Protein GI | 222148893 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0720427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGACA TCCTGAAGAA AATCGAAGCC TATAAGCGCG AGGAAATCGC GGCAGCCAAG
AATGCCGTAC CGCTGGACGA GATCAAGGCC CGCGCCGCCG ACCAGCCACC GGCACGTGGC
TTCTACAAGG CATTGCGGGC AAAGCAGGCA GCTGGCAATT TCGGACTGAT TGCCGAAATC
AAGAAAGCCA GCCCGTCCAA AGGTCTGATC CGTCCCGATT TTGACCCACC GGCGCTGGCT
AGCGCCTATG AAGCGGGCGG GGCTGCCTGT CTGTCCGTGC TGACCGACGC TCCAAGCTTT
CAAGGTGCAC CGGATTTTCT GGTCGCAGCC CGCGCGGCCT GCACACTTCC AGCGCTGCGC
AAGGATTTCA TGTTCGAGGC CTATCAGGTG CATGAAGCGC GTGCCTGGGG CGCAGATTGC
ATCCTGCTGA TCATGGCGTC CCTGTCAGAT TCTGAGGCCA CCGATCTGGA AGGGGAAGCC
CTGGCGCTTG GCATGGACGT GCTGATTGAG GTGCATGATG AAGAGGAAAT GCTGCGGGCG
CTGAAACTCG CCTCACCGCT CGTCGGCATC AACAATCGCA ATCTGCGGAC GTTCGAGGTC
GATCTTGCCG TCAGCGAACG GCTGGCCGCC ATGGTTCCTG CAGATCGGTT GCTGGTTGGT
GAAAGCGGAA TTTTCACCCA CGAAGACTGC CTTCGCCTGC AAAAATCCGG CATCGAAACT
TTCCTGGTCG GAGAAAGCCT GATGCGCAAA GACGATGTGA CTGGTGCCAC CAAGGCGCTC
TTGACTGGTG CATCCGACCG CATAGCCGCC GAATGA
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| Protein sequence | MSDILKKIEA YKREEIAAAK NAVPLDEIKA RAADQPPARG FYKALRAKQA AGNFGLIAEI
KKASPSKGLI RPDFDPPALA SAYEAGGAAC LSVLTDAPSF QGAPDFLVAA RAACTLPALR
KDFMFEAYQV HEARAWGADC ILLIMASLSD SEATDLEGEA LALGMDVLIE VHDEEEMLRA
LKLASPLVGI NNRNLRTFEV DLAVSERLAA MVPADRLLVG ESGIFTHEDC LRLQKSGIET
FLVGESLMRK DDVTGATKAL LTGASDRIAA E
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