| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2565 |
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| Symbol | ppiD |
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| ID | 7386581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2119106 |
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| End bp | 2120995 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651660 |
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| Product | peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_002549848 |
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| Protein GI | 222148891 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.119392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGTGA TCCTGAGAAA AGCTGCCGGC ACCTGGGTGG CAAAAGGGCT TCTTCTTTTG
CTTGTCGCGT CCTTCGCGAT TTGGGGCATT TCCAGCTCGA TCATGAGCGA CACGTCGGAC
AAGGTCATCA AGGTCGGCAG CCAGAGCGTC AATTCCAACG AATTCCGCCT CGCCTATCAG
CGGCAGATCT CCGATCTCAG CCGCCGTTTC GGCACACAAT TGACAAGCGA GCAGGCCCGT
TCGCTTGGCA TCGAATCGCA GGTCTACCAA CAGTTAGTCG CGGGTGCAGC CCTCGATCAG
TTGGCCTCGG ACATGAATCT CGGCCTTTCC CAGGACCGCC TGGCGCAGTT GATCGGTGAC
GATCCGGCCT TCAAGAACAC CAATGGCCAG TTCGACCGGC AATTATTCAC CTCACGGCTG
CGCAATTCCG GCATTCGTGA GCAGGATTAT ATCACCGAGC GCTCAAAGGT CGCGGTTCGC
AGCCAGATCG TCGATGCGAC GGCGGAAGGA TTCGTGCCTC CGAAAGTGCT GATCGATGCG
TTGAAACTCT ATCGCCAGGA AAGCCGCAGC ATTGACTACC TGCTGCTGAC CACTGCCAAT
ATCGACCCGA TCAAGGCACC GGACGAAACG GTCCTTAAAA CCTGGTTCAA CACGATGAAA
TCGCGCTACC GCGCGCCGGA ATATCGCAGC TTTTCCTATG TAAAACTGGA GCCTGCCGAT
ATCGCCGATC CGAAAGCCGT GACCGACGAG CAGGTGAAGC AGGAATACGA CGCCAACCTC
AAGAAATTCG AAGTGGCCGG CACCCGGACG CTGGAGCAAT TGACCTTCCC GACCAAGGAA
CTGGCCGAAA CCGCGGCTCA GTCGCTGAAG AATGGCAAGA CCTTCGATCA GTTGGTGGCC
GACCAGGGCA AGACGGCGAC AGATGTGCTG CTGGGTGATT TCACCCGGGC AGATATTCCC
GATCAGAAAC TGGCCGATGC CGCATTCGCC GTCGCCAAAG ACAGCGATAC AACACCTGTC
GTTGAAGGCG CCTTCGGCCC GGTTATTCTG CGGGTCAGCA ACATCAAGCC AAGCCACACG
AAGACGCTGG ACGAAGTCAA GGATCAGATT CGCGCTGATC TTGCTGCCAA TGCCGCGGCC
CAGCAGATCA ATGACGTGCA TGACCGGTTT GAGGATATGC GTGCCTCCGG CTCGAGCCTT
GAGGAAGCCG CCACTAAGGC TGGTCTGAAA GCCATCAAGA TTGACGGTAT CGATGCTCAG
GGACAGGACA AGACAGGCAA GCAGGCAGAA AATCTGCCGG AAAAAGCCAA TCTGTTAAAA
TCTGTCTTCG AAACCGAAGC GGGTGCAGAG CCCCTGCCCC TCAATATCGG CAGAAATGGC
TATCTGTGGT TCGACGTGAC GTCCATCGAT GCGTCTCGTG AGAGAACGCT GGACGAGGTC
AAGGACAAGG CCGTTTCCGA CTGGACCACC GAGCAGCAGA AACAAGCGCT GGGCGCCAAG
GTGGAGCAGT TGAAGGCCAA GGCCGATACC GGCGTGGCAC TGGCTGATCT CGCGACTGAA
CTGGCCATCG GCGTCGAGAC CAAAGCCGGT CTTCGCCGCG ATACCGAAGA TCCGGTGCTT
GGCCCTGCCG CCGTCCAGGC CGCATTCCGT GGACCGTCCG GCACGATTGG CTCGGCGGTT
GGCGCCGATC CGATGACCCA GATCCTGTTG AAGGTTACGG ATGTCAACAC CCAGCCGACC
GGCGATGTCG TAGACCAGCA GGAAAGCCAG ATTACCGCGC TGGCGAAATC CGCCGGTGAC
GATATTCTCG ATCAGATGGT CAACCAGCTC CAGACCAAAT ATGGCGTCAC CATCAATCAG
GCGCTGGCCC AGCAGGCCAT CACACGCTGA
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| Protein sequence | MLVILRKAAG TWVAKGLLLL LVASFAIWGI SSSIMSDTSD KVIKVGSQSV NSNEFRLAYQ
RQISDLSRRF GTQLTSEQAR SLGIESQVYQ QLVAGAALDQ LASDMNLGLS QDRLAQLIGD
DPAFKNTNGQ FDRQLFTSRL RNSGIREQDY ITERSKVAVR SQIVDATAEG FVPPKVLIDA
LKLYRQESRS IDYLLLTTAN IDPIKAPDET VLKTWFNTMK SRYRAPEYRS FSYVKLEPAD
IADPKAVTDE QVKQEYDANL KKFEVAGTRT LEQLTFPTKE LAETAAQSLK NGKTFDQLVA
DQGKTATDVL LGDFTRADIP DQKLADAAFA VAKDSDTTPV VEGAFGPVIL RVSNIKPSHT
KTLDEVKDQI RADLAANAAA QQINDVHDRF EDMRASGSSL EEAATKAGLK AIKIDGIDAQ
GQDKTGKQAE NLPEKANLLK SVFETEAGAE PLPLNIGRNG YLWFDVTSID ASRERTLDEV
KDKAVSDWTT EQQKQALGAK VEQLKAKADT GVALADLATE LAIGVETKAG LRRDTEDPVL
GPAAVQAAFR GPSGTIGSAV GADPMTQILL KVTDVNTQPT GDVVDQQESQ ITALAKSAGD
DILDQMVNQL QTKYGVTINQ ALAQQAITR
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