Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2563 |
Symbol | gltA |
ID | 7386580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2117619 |
End bp | 2118908 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643651659 |
Product | type II citrate synthase |
Protein accession | YP_002549847 |
Protein GI | 222148890 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.102281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGAAC AAAGCGCAAA CTTGAAGATT GAGGACAAGG CCGTCGATCT TGACGTGCGA AGCGGCACGA TCGGCCCCGA TGTTATCGAC ATCGGCGCTC TTTATAAGCA TACCGGCAAG TTTACCTATG ATCCCGGATT TACCTCCACG GCATCATGCG AATCGAAAAT CACCTATATC GATGGCGACG AAGGCGTGCT GCTGCACCGC GGCTACCCCA TCGAACAGCT GGCTGAAAAA GGCGACTTCC TGGAAGTCTG CTACCTGCTG CTCTACGGCG AACTGCCGAC AGTCGCTCAG AAAAAGGACT TCGATCACCG CGTCACGCAT CACACCATGG TGCATGAGCA GATGTCGAAA TTCTTCTCAG GCTACCGTCG CGACGCCCAT CCGATGGCGG TCATGGTCGG TACTGTCGGC GCTCTGTCGG CTTTCTATCA CGACTCGACC GACATCACCG ATCCGCACCA GCGCATGGTT GCCAGCCTGC GGATGATCGC CAAGATGCCG ACCATCGCCG CCATGGCTTA TAAGTATCAC ATCGGCCAGC CCTTCGTTTA TCCCAAGAAC GATCTGGATT ACGCCGCCAA CTTCCTCAAC ATGTGCTTTG CCGTGCCTTG CGAGGAATAC AAGGTCAACC CGGTTCTGGC CCGCGCCATG GACCGGATCT TCATCCTGCA TGCCGATCAT GAGCAGAACG CCTCCACCTC CACGGTGCGC CTGGCTGGCT CGTCGGGTGC CAATCCGTTT GCCTGCATCG CGGCTGGCAT CGCCTGCCTC TGGGGTCCTG CCCATGGCGG CGCCAACGAA GCGGCCCTGA ACATGCTGCG CGAAATCGGC ACGGTTGACC GGATTCCGGA ATATATCGCC CGCGCCAAGG ACAAGAACGA TCCGTTCCGC CTGATGGGCT TCGGTCACCG GGTCTATAAG AACTACGATC CGCGCGCCAA GATCATGCAG AAGACCATGT ATGAAGTGCT GGAAGCCACC GGCAATGCCG GCGATCCACT GATGCAGGTC GCGCTCGAGC TGGAAAAGAT CGCCTTGAGC GATGAATATT TCATCGAGAA GAAGCTCTAT CCGAATGTCG ATTTCTATTC CGGCATTACG CTTCGCGCCC TTGGATTCCC GACGGAAATG TTCACCGTTC TGTTCGCGCT CGCCCGCACC GTCGGCTGGA TTGCTCAGTG GAACGAGATG ATCGAGGATC CGCAGCAGCG CATCGGTCGT CCGCGCCAGC TGTACACCGG CGCACCCAAG CGCGACTACC TGCCCGTCGC CAAGCGCTGA
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Protein sequence | MTEQSANLKI EDKAVDLDVR SGTIGPDVID IGALYKHTGK FTYDPGFTST ASCESKITYI DGDEGVLLHR GYPIEQLAEK GDFLEVCYLL LYGELPTVAQ KKDFDHRVTH HTMVHEQMSK FFSGYRRDAH PMAVMVGTVG ALSAFYHDST DITDPHQRMV ASLRMIAKMP TIAAMAYKYH IGQPFVYPKN DLDYAANFLN MCFAVPCEEY KVNPVLARAM DRIFILHADH EQNASTSTVR LAGSSGANPF ACIAAGIACL WGPAHGGANE AALNMLREIG TVDRIPEYIA RAKDKNDPFR LMGFGHRVYK NYDPRAKIMQ KTMYEVLEAT GNAGDPLMQV ALELEKIALS DEYFIEKKLY PNVDFYSGIT LRALGFPTEM FTVLFALART VGWIAQWNEM IEDPQQRIGR PRQLYTGAPK RDYLPVAKR
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