| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2562 |
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| Symbol | |
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| ID | 7385916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2114251 |
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| End bp | 2117274 |
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| Gene Length | 3024 bp |
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| Protein Length | 1007 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651658 |
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| Product | hypothetical protein |
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| Protein accession | YP_002549846 |
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| Protein GI | 222148889 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0658] Predicted membrane metal-binding protein |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.418924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGATA CGGCGGAATG GGAACTGATC AGGCAAAAAG AAGCGCGTCC GGCGCGCGGC
TTGCCATGGG ATAGTCGCTC TTCCAAAACC CTGTTTGACG AGGTTCTACG GCGTCCGCAC
ATAGACCCGG AGGACGAGGC GGAAGCCCCT GATTTCGAGG GCCACTTCAG CGCATCGCCG
CTGCTGGTCT CCCGCTGGCA GCGCCTTCTG CGTGCTCTCC ACCGGGATGC TCTGCAGGAG
CTTGCCTATG GTCGGACATT TCTGTTTTTA CCCGTTCTGC TTGGTCTCGG TGCGATCTGG
TGGTTTACCC GTCCGCAGGA CCTTCCCCGT CTGCCGATCT TCCTGACTTT TTGTGCAGCC
GGAGTGGTCT GGCTGCGGGT CCGTTACCGT CATCCTGTCC TGGCCACCGT CTGCGGCATT
GCAACTCTCG GTCTTGCTGG CATGTTGCTA GCCGATGTGC AAACCGCGCG TCTGGACACG
ATCATCATAG ACAGTGCAGT GACGACCGTG GTGCGCGGCA AAGTGGTTTC GGTAGAACCA
AATGCGGACG GCAATCAAAG ATATGTGATT GCACTGCATC AAACGCGCTA CCCTAGTCTT
AAGCGTATGC CACAGCAGGT CGCGCTTCTG GCCCGCGGCA AGCATGTTCC CTTCAACCCC
GGCGACTGGA TTGAGGGCAG GGCGCGGCTC TCCCCGCCGT CCGGACCGGC TTTGCCGGGC
TTAAACGATT TTGCCTTTGC CTCCTATTTT GCGGGCACCG GCGCGATCGG CTATTTTTAC
CAGCCACCCA AGCCATTTCT GCCGGGACCA GAGATAGCGC CACCGGATTT TTGGGAGCGT
GCCGGAATCA AGCTGGATGA AACGACACAG GAATTGCGCA ATGGCATTTC TGATCGTATC
AGGGCCATCG TGCCGGGCGA TGCGGGCGCG TTTGCCGTGG CGATTGTGAC CGGCGAGCGG
CGCGGCCTTT CGGAGGAGGC CAATAACGAT CTTCGCGTTT CCGGCCTTGC CCATATCATC
TCGATTTCCG GTCTGCATAT GGCACTGGCC GGTGGGCTGT TCTTCGTGGG GATCCGGCGC
CTCTTGAGCC TTGTCCCTGG CATGGCGGAG GCCCGCTCGA TCAAGAAGAC TGCCGCAGCA
GGGGCGATAG CCACCACGAC CGGCTATTTT CTCATTTCCG GCTACGACAT TGCCGCCCAG
CGCGCGTATC TGATGATGGT TATCATGCTG TCGGCGGCTT TCTTCGACCG ACCTGTGCTC
AGCCTGCGCA ATGCCGCGCT GGCGGCTATC CTTGTGATTC TCCTCTCGCC GTCCCAGGTC
ATGGGACCGA GCCTGCAAAT GTCCTTTGCA GCCACCTTTG CCCTGATCGC CGGATTCGAC
CTTTGGCGCC AACGCCCAAG AATGCCTCCC ATCCTGCCGG CGATCCCGGC GCTGACAGTG
CTGAAGCCGT TGATGACGCT GGTCAGCGGC ATTCTGATGA CCTCTGCACT TGGCGGTTTT
TCCACAGCGA TGTTTTCAGC GGCGCATTTC CACCGGGTCG GATTGCATGG GTTGGAGGCA
AATCTCCTGG CGGCTCCCCT TATGTCGATG CTTGTCATGC CAGCGGCGAT GATCGGCGTG
CTGCTCATGC CGTTCGGTCT GGACCAATGG CCGATCCAGT TGATGGGGCT TGGCCTTGAG
GGCGTATTGA TGATTGCCAG CAAGGTCGCG AGCTGGGGTA ATGGCTTCAC CTTCGGCCGG
TTCGAGTGGT GGTTTCTGCC GGTCTCGGCA ACCGGCCTGC TGATACTGAC CCTGATGAAG
ACGCGGCTGC GGCTGATTGG CGTGGCGATG ATGCTGACGG CGTTTGGCTA TGAGGCGATA
AAAACCGATC CGCCACTGCC CGATCTCGCC ATATCCGAAG ATGGCCAACT GTTCGCTCTC
TTTCGGACCG ACGACCGCCA TCTCTTGACC ATCGCCACCA ACAAGAAGCG TCCGCCGAGT
TTCATTTTCA ACCAATGGCG CTCAGTGCTC GACATTGCCG ATCCGATTGC GCCTGAAATA
TTGCCCAAGC TGGCAGCTGT TGAGATCGAG ACAGGCCAAC AGGGCGCGGG GAAAGGCGAG
GACAAGGCGC GGGAAACAAC GCGGGCCGGA AAAACAAAGA CGGGGGGCCA AAAAGTCAAG
GGAAGAGAGC CAGTAGAGCC GCAACAGGCG ATGGCGGAGA TGACGACGGC AAAGGAGAAG
GCCGATAAAA AACCTGATCT TTTCCATTGC CGCACCGATG CCTTTTGCCT CGCGAGGCTC
AGCAATGGTT GGACCGTCAG CCTGGTGCAG AACCGCGACT ACAACCAGGC CGCTTGCGCC
CTGTCCGACC TGATCGTTTC GACTGAGGCC GGCCGTGATG CCGAATGTAA GGCGCCGATA
GCATCCACTA TTCCCTCAGA AAAAAACGAA ACCACCGTTA CCCGGGAGCC TGCGGAAGAC
GCGACTGGGG CGGACGTTGA AATTGAACGG ATCATGGCCG ATGGTGACAT GCTGCCATCT
GACAACAGCA GCCCGTCCGT TCGCTCCCAA ACGATCAGCC GAACGCAAGC GGGAGACATT
TCTGCAGCCA GTGTAACGAC GGTACCGGGG AAGGGTGTTG CAGTGCCCAC AGATAGCCAA
GTGAAGGGCG GCGCCTCAAA CTCAGACCAG AATTCCCCGT CCCTAATAGA AGCGGGCGAA
CCTCTCGCCT TCTTGCAAAC CGAGAAGGCC GCTAACGCTG GACCGATGCT GTCACGTCCC
CCGAAAGTCC TGACCCGTAA CGATCTGCGA CGGTTCGGTG CAATGGAGAT CACGCTTGGT
GATCCCGCCA CCCGAACGCT GCATATCGTT ACGGCATTTC AAAATCAGTA TCGGCCCTGG
ACCCGCCATC GTTATTTCGA CTGGCGCAGC AATCGCTATG ATCGACCGAA TGGTACGGCC
CACGCCAATG TTCCATCTGC TGCCAGCGAC GACGTCCAGT CAGGCGCTGG AGATGTCAGT
GAGCTTAGTG ATAGCGACGA ATAA
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| Protein sequence | MPDTAEWELI RQKEARPARG LPWDSRSSKT LFDEVLRRPH IDPEDEAEAP DFEGHFSASP
LLVSRWQRLL RALHRDALQE LAYGRTFLFL PVLLGLGAIW WFTRPQDLPR LPIFLTFCAA
GVVWLRVRYR HPVLATVCGI ATLGLAGMLL ADVQTARLDT IIIDSAVTTV VRGKVVSVEP
NADGNQRYVI ALHQTRYPSL KRMPQQVALL ARGKHVPFNP GDWIEGRARL SPPSGPALPG
LNDFAFASYF AGTGAIGYFY QPPKPFLPGP EIAPPDFWER AGIKLDETTQ ELRNGISDRI
RAIVPGDAGA FAVAIVTGER RGLSEEANND LRVSGLAHII SISGLHMALA GGLFFVGIRR
LLSLVPGMAE ARSIKKTAAA GAIATTTGYF LISGYDIAAQ RAYLMMVIML SAAFFDRPVL
SLRNAALAAI LVILLSPSQV MGPSLQMSFA ATFALIAGFD LWRQRPRMPP ILPAIPALTV
LKPLMTLVSG ILMTSALGGF STAMFSAAHF HRVGLHGLEA NLLAAPLMSM LVMPAAMIGV
LLMPFGLDQW PIQLMGLGLE GVLMIASKVA SWGNGFTFGR FEWWFLPVSA TGLLILTLMK
TRLRLIGVAM MLTAFGYEAI KTDPPLPDLA ISEDGQLFAL FRTDDRHLLT IATNKKRPPS
FIFNQWRSVL DIADPIAPEI LPKLAAVEIE TGQQGAGKGE DKARETTRAG KTKTGGQKVK
GREPVEPQQA MAEMTTAKEK ADKKPDLFHC RTDAFCLARL SNGWTVSLVQ NRDYNQAACA
LSDLIVSTEA GRDAECKAPI ASTIPSEKNE TTVTREPAED ATGADVEIER IMADGDMLPS
DNSSPSVRSQ TISRTQAGDI SAASVTTVPG KGVAVPTDSQ VKGGASNSDQ NSPSLIEAGE
PLAFLQTEKA ANAGPMLSRP PKVLTRNDLR RFGAMEITLG DPATRTLHIV TAFQNQYRPW
TRHRYFDWRS NRYDRPNGTA HANVPSAASD DVQSGAGDVS ELSDSDE
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