| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2561 |
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| Symbol | lexA |
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| ID | 7385915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2113551 |
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| End bp | 2114270 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643651657 |
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| Product | LexA repressor |
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| Protein accession | YP_002549845 |
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| Protein GI | 222148888 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.936148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGACTC GCAAGCAACA GGAACTTTTG CTGTTTATAC ACGAGCGCAT GAAGGAGTCT
GGGGTGCCGC CCTCCTTCGA TGAGATGAAG GATGCCCTGG ACCTCGCCTC AAAATCCGGC
ATTCACCGGC TGATCACCGC TTTGGAAGAG CGCGGTTTCA TCCGTCGCTT GCCAAACCGT
GCACGAGCGC TGGAAGTTAT CAAGCTGCCA GAGGCCATGA CCTCCAGCAT ACCGCCCCGA
CGTACAGGAT TTTCGCCATC CGTCATTGAA GGCAGCCGAG GCAAGTTGCA GGCAGTTCCA
TCCGCTCCGG CCAAACAGGT CGAGGAAGTA CGCAATTCCT CATCCATACC TGTCATGGGC
CGTATCGCGG CAGGCGTGCC GATCTCCGCT ATCCAGAACA ACACCCATGA CATTTCCGTG
CCGATGGAAA TGCTGGGCAG CGGCGAACAT TACGCCCTTG AGGTCAAAGG CGATTCGATG
ATCGAAGCTG GCATTCTCGA TGGCGACACG GTGATCATCC GCAACGCCAC CACCGCCAAT
CCGGGCGATA TCGTCGTTGC TCTGGTAGAC GATGAGGAAG CCACGTTGAA ACGCTTCCGC
CGCCGTGGGG CGTCCATCGC GCTGGAAGCT GCCAATCCGG CCTATGAGAC CCGGATTTTC
GGACCGGACC GGGTAAAAAT CCAGGGCAAG CTTGTCGGTC TTATTCGTCG CTATCACTAA
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| Protein sequence | MLTRKQQELL LFIHERMKES GVPPSFDEMK DALDLASKSG IHRLITALEE RGFIRRLPNR
ARALEVIKLP EAMTSSIPPR RTGFSPSVIE GSRGKLQAVP SAPAKQVEEV RNSSSIPVMG
RIAAGVPISA IQNNTHDISV PMEMLGSGEH YALEVKGDSM IEAGILDGDT VIIRNATTAN
PGDIVVALVD DEEATLKRFR RRGASIALEA ANPAYETRIF GPDRVKIQGK LVGLIRRYH
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