| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2554 |
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| Symbol | |
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| ID | 7385909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2104615 |
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| End bp | 2105385 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643651652 |
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| Product | ABC transporter nucleotide binding/ATPase protein (amino acid) |
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| Protein accession | YP_002549840 |
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| Protein GI | 222148883 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.20723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAG CTCAAACCTC CATCGAGAAA GCCCCAACCA AAACCGCAAT CGAATTGATT
GCCATGAACA AATGGTATGG CGAATTTCAC GTCCTTCGTG ACATCAACCT CAAGGTCGCG
ACCGGCGAGC GGATCGTCAT CGCGGGTCCG TCGGGCTCCG GCAAGTCGAC GATGATCCGC
TGCATCAACC GGTTGGAGGA ACACCAGACC GGACAGATTA TCGTCGACGA CATCGAGTTG
ACCAACGACC TCAAGAAGAT CGATGAAGTC CGTCGCGAAG TCGGCATGGT GTTCCAGCAC
TTCAATCTGT TCCCGCATCT GACGATCCTC GAGAATTGCA CACTGGCACC GATCTGGGTC
CGCAAGATGC CGAAGAAGGA AGCCGAAGAA GTTGCGATGC ACTATCTGAA GCGCGTCAAG
ATCCCGGAAC AGGCCAATAA ATATCCAGGC CAGCTCTCCG GTGGCCAGCA GCAGCGCGTG
GCTATTGCAC GTGCGCTCTG CATGAAGCCA AAAATCATGC TATTCGACGA ACCGACCTCG
GCACTTGACC CGGAAATGGT CAAGGAAGTG TTGGACACTA TGGTGGGTCT GGCGGAAGAG
GGCATGACCA TGCTGTGCGT TACCCATGAA ATGGGCTTCG CCCGCCAGGT TGCCGACCGG
GTGATCTTCA TGGACCAGGG CCAGATCGTC GAACAGAACG CGCCCGCCGA GTTCTTCGAC
AACCCGCAGC ACGAGCGCAC CAAGCTGTTC CTCAGCCAGA TCCTGCACTA A
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| Protein sequence | MAEAQTSIEK APTKTAIELI AMNKWYGEFH VLRDINLKVA TGERIVIAGP SGSGKSTMIR
CINRLEEHQT GQIIVDDIEL TNDLKKIDEV RREVGMVFQH FNLFPHLTIL ENCTLAPIWV
RKMPKKEAEE VAMHYLKRVK IPEQANKYPG QLSGGQQQRV AIARALCMKP KIMLFDEPTS
ALDPEMVKEV LDTMVGLAEE GMTMLCVTHE MGFARQVADR VIFMDQGQIV EQNAPAEFFD
NPQHERTKLF LSQILH
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