| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2538 |
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| Symbol | clpS |
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| ID | 7385897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2093098 |
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| End bp | 2093451 |
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| Gene Length | 354 bp |
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| Protein Length | 117 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643651640 |
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| Product | ATP-dependent Clp protease adaptor protein ClpS |
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| Protein accession | YP_002549828 |
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| Protein GI | 222148871 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2127] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.349109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAATGA TCGCGCAACC GATCGTCATG CAAGCGCAGG GTAACAACGA CGGACCAAAC
AGGGGCACGT CGGTTATCAC GCGCACGAAG CCGAAAACCA AGAAGCCCAA TTTATATCGC
GTTCTGCTGC TAAATGATGA CTATACGCCG ATGGAGTTCG TCATCCATAT TCTGGAGCGT
TTCTTCCAAA AGGACAGGGA AGCGGCAACC CTCGTCATGC TGCACGTACA CAACCACGGG
GTAGGGGAAT GCGGCGTCTT CACCTATGAA GTCGCCGAAA CCAAGGTAAG CCAAGTTATG
GACTTCGCGC GGCAGCACGA GCATCCGCTG CAATGCGTCA TGGAAAAGAA ATGA
|
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| Protein sequence | MEMIAQPIVM QAQGNNDGPN RGTSVITRTK PKTKKPNLYR VLLLNDDYTP MEFVIHILER
FFQKDREAAT LVMLHVHNHG VGECGVFTYE VAETKVSQVM DFARQHEHPL QCVMEKK
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