| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2528 |
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| Symbol | rpsB |
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| ID | 7385888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2084370 |
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| End bp | 2085116 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651631 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_002549819 |
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| Protein GI | 222148862 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTCAGC TTCTGGAAGC TGGCGTTCAC TTCGGCCACC AGACACATCG CTGGAACCCG
AAGATGAAGC CGTATATCTT CGGCGACCGT AACAACATCC ACATCATCGA TCTGGCTCAG
ACCGTACCGA TGCTGTCGCG CGCCCTGCAG GTCGTATCTG ACACGGTTGC CCGTGGCGGT
CGCGTTCTGT TCGTCGGCAC TAAGCGTCAG GCCTCTGACC TGATTGCCGA TGCTGCCAAG
CGTTCTGCCC AGTATTACGT CAATTCCCGC TGGCTCGGCG GCATGATGAC AAACTGGAAG
ACCATTTCCA ATTCGATCCA GCGCCTGCGC AAGCTCGACG AAATCCTCAA TTCGGAAGCC
CAGGGCTTCA CGAAGAAGGA ACGTCTGAAC CTTGAGCGCG AGCGCGAAAA GCTTGACAAG
GCTCTCGGCG GTATCCGCGA CATGGGCGGC ACCCCGGACC TGATGGTGAT CGTTGACACC
AACAAGGAAA AGATCGCTAT CGATGAAGCC AAGCGCCTGG GCATTCCGGT CGTTGCCATC
ATCGACTCGA ACTGCGATCC GGACCTGATC GATTACCCGA TCCCAGGCAA TGACGACGCT
TCGCGCGCCA TCGCTCTTTA CTGCGACCTG ATCTCGCGCG CTGCCATCGA CGGCATCGCC
CGTCAGCAGG GCTCGTCTGG CCGCGATATC GGCGCTTCGG TTGAAGCTCC AATCGAGCCT
GCTCTGGAAG GCTCCGCTGA GGCTTGA
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| Protein sequence | MRQLLEAGVH FGHQTHRWNP KMKPYIFGDR NNIHIIDLAQ TVPMLSRALQ VVSDTVARGG
RVLFVGTKRQ ASDLIADAAK RSAQYYVNSR WLGGMMTNWK TISNSIQRLR KLDEILNSEA
QGFTKKERLN LEREREKLDK ALGGIRDMGG TPDLMVIVDT NKEKIAIDEA KRLGIPVVAI
IDSNCDPDLI DYPIPGNDDA SRAIALYCDL ISRAAIDGIA RQQGSSGRDI GASVEAPIEP
ALEGSAEA
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