Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2525 |
Symbol | tsf |
ID | 7385887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2083151 |
End bp | 2084077 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643651630 |
Product | elongation factor Ts |
Protein accession | YP_002549818 |
Protein GI | 222148861 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0264] Translation elongation factor Ts |
TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAGA TCACTGCTGC AATGGTGAAG GAACTGCGCG AAAAGTCCGG CGCAGGCATG ATGGATTGCA AAAAGGCGCT GGCTGAAAAT GGCGGCGACA TGGAAGCATC CATCGACTGG CTGCGCGCCA AGGGCATTGC CAAGGCCGAC AAGAAGTCCG GTCGCACCGC AGCCGAAGGC CTGATCGGTA TTGCCAGCTC CGGCACAACC GCCGTGGTCG TCGAAGTCAA TTCCGAAACT GACTTCGTTG CCCGCAACGA TGCCTTCCAG GACATGGTTC GCGGCATCTC CAACGTCGCT CTCTCCACCG ACGGCACGGT TGATTCCATC AATGCCGCGA CTTATGCCGC GACCGGCAAG TCGGTTTCCG ACTCGATCAA GGACGCGATT GCGACCATTG GCGAGAACAT GGCTCTGCGC CGCGCCACCC AGCTGAAGGT TGAGGACGGC GTTGTCGCAA CTTACGTCCA CAATGCTGTT GCTGACGGTC TCGGCAAGCT CGGCGTGCTG GTTGCCCTGA AGTCCACCGG CAACAAGGAA GCGCTCAACA CGATCGGTCG CCAGATCGCC ATGCATGTTG CTGCCACCAA CCCGCTGGCT GTGCGCGCTG AAGAAGTAGA TGCCGCTGTT GCCGAGCGCG AGCGTAATGT GTTCATCGAG CAGTCGCGCG AATCGGGCAA GCCGGAAAAC ATCATTGAAA AGATGGTTGA AGGCCGGATG CGCAAGTTCT TCGAAGACGT GGCCCTGCTG TCGCAGGCTT TCGTTATCAA TCCCGACCTG ACCGTTGCCG CCGCCCTCAA GGAAGCCGAA AAGGACGTTG GCGCGCCAAT CGAGATCACC GGCATCGCCC GCCTGCTGCT GGGTGAAGGC ATTGAGAAGG AAGAGAGCGA TTTCGCTGCC GAAGTGGCTG CTGTCGCCAA GGGCTGA
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Protein sequence | MTEITAAMVK ELREKSGAGM MDCKKALAEN GGDMEASIDW LRAKGIAKAD KKSGRTAAEG LIGIASSGTT AVVVEVNSET DFVARNDAFQ DMVRGISNVA LSTDGTVDSI NAATYAATGK SVSDSIKDAI ATIGENMALR RATQLKVEDG VVATYVHNAV ADGLGKLGVL VALKSTGNKE ALNTIGRQIA MHVAATNPLA VRAEEVDAAV AERERNVFIE QSRESGKPEN IIEKMVEGRM RKFFEDVALL SQAFVINPDL TVAAALKEAE KDVGAPIEIT GIARLLLGEG IEKEESDFAA EVAAVAKG
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