Gene Avi_2521 details

Gene Information

• Locus tag: Avi_2521
• Symbol: frr
• ID: 7385885
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: -
• Start bp: 2081563
• End bp: 2082123
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 643651628
• Product: ribosome recycling factor
• Protein accession: YP_002549816
• Protein GI: 222148859
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0233] Ribosome recycling factor
• TIGRFAM ID: [TIGR00496] ribosome recycling factor

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.277739
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGCAG GTATTGATCT CAACGATATC AAGCGCCGCA TGGATGGCGC GATTAACGCA 
TTCAAGAGCG ACCTCGCCTC GTTGCGCACT GGTCGCGCCT CGGCCAATAT TCTCGACCCG 
GTCATGGTTG AAGCCTATGG TTCTCGCGTT GCGCTGAACA CCGTGGCCAA TATCACCGTG 
CCGGAACCGC GCATGCTGGG CGTCTCTATC TGGGACAAGA GCATGGTCGG TGCGGTCGAC 
AGGGCGATCC GGGAATCCAA TCTCGGCCTC AATCCGATTG TCGACGGCCA AAACCTGCGC 
ATTCCGCTGC CGGAACTGAA TGAAGAGCGC CGCAAGTCGC TGGTCAAAGT GGCGCATGGT 
TATGCCGAAA ACTCGAAAGT CGCGATCCGC CATGTTCGCC GCGATGGCAT GGACAGCCTG 
AAAAAGGCTG AAAAGGATGG CGAAATCGGC AAGGACGATG CGCGAAGCCT TTCGGAAAAG 
CTGCAAAAGA TGACGGATGA CACGATTTCC GATATCGATC GCTTGCTTGC CGAAAAGGAA 
AAGGAAATCA TGCAGGTCTA G 

 

Protein sequence

MTAGIDLNDI KRRMDGAINA FKSDLASLRT GRASANILDP VMVEAYGSRV ALNTVANITV 
PEPRMLGVSI WDKSMVGAVD RAIRESNLGL NPIVDGQNLR IPLPELNEER RKSLVKVAHG 
YAENSKVAIR HVRRDGMDSL KKAEKDGEIG KDDARSLSEK LQKMTDDTIS DIDRLLAEKE 
KEIMQV