| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2515 |
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| Symbol | lpxD |
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| ID | 7385880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2075043 |
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| End bp | 2076110 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643651623 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_002549811 |
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| Protein GI | 222148854 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.168865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATGGAGC ATGAAACTTT TTATCCGCCC CACGCGGGCG TCAGTTTGAA AGAACTGGCG
GACCGTCTTG GGGCGGAACT GTTACAGGAT GAGGCGGGTG ACCGCGTCAT TCGTTCGGTG
GCGCCTGTCT ATCGGGCAAA GCAGAGCGAT ATTTGCTATA TCCTGTCGAG GCGCAACAAA
GCCGAACTCG AAACCTGTGA GGCCGGGGCC ATCCTTTGCG ATGTTGCGCT GCGTTCGCTG
ATCCCGGAGC ATATTCCGGT TCTGCTGATC AAAAACCCGC ATGCAGCTTT TGCTATCGCA
GGGCAGTTCC TGCATCCAGA TGGCAAACAG CCTTTGCCTG TTGCCCGGCC AGGCGCTGCC
GACATTTCTC CTGCGGCCTT TGTCGATCCG AGTGCCCGTC TTGAAGATGG GGTTGTGGTC
GAGCCGATGG CGGTGATTGG TGCGGATGTG GAAATCGGCG CTAGCAGTCT GATCGGCGCG
GGCTCAGTGA TTGGCCGTGG TGTCAAGATC GGCCGCGATT GTTCGATTGC CGCAGGCACC
AGTATTATTG CTAGCTATAT CGGCAATGGC GTTATCATCC ATAACGGGGC GCGCATCGGC
CAGGACGGTT TTGGTTATGC GCCAGGCCCG CGTGGCATGG TGAAAATCGT GCAGATCGGA
CGGGTGATTA TCCAGGACAA TGTGGAAATC GGCGCCAATA CGACGATTGA CCGCGGCACG
ATGGATGACA CGGTGATCGG CGAAGGAACC AAGATCGACA ATCAAGTCCA GATCGCTCAC
AACGTGCGCA TCGGCCGCCA TTGCGGCATC GTAGCCCAGG TCGGCATTGC CGGCAGCACG
GTGATTGGCG ATGGCGTATT GATTGGTGGT GGCTCTGGCG TTAACGGCCA TATCAAGATA
GGTGACGGTG TTCAAATTGC CGCGATGAGC GGTGTTATTG GCGATCTTCC GCCGGGCGAG
AAATTCGGTG GTATTCCGGC ACGTCCGCTT GGGGATTTTC TCAGGGATTG CGCCCAGATC
ATGGGACGGT CTGAAGGCAA GTCGAAGGTT GGAAAGGGGC AGAAATGA
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| Protein sequence | MMEHETFYPP HAGVSLKELA DRLGAELLQD EAGDRVIRSV APVYRAKQSD ICYILSRRNK
AELETCEAGA ILCDVALRSL IPEHIPVLLI KNPHAAFAIA GQFLHPDGKQ PLPVARPGAA
DISPAAFVDP SARLEDGVVV EPMAVIGADV EIGASSLIGA GSVIGRGVKI GRDCSIAAGT
SIIASYIGNG VIIHNGARIG QDGFGYAPGP RGMVKIVQIG RVIIQDNVEI GANTTIDRGT
MDDTVIGEGT KIDNQVQIAH NVRIGRHCGI VAQVGIAGST VIGDGVLIGG GSGVNGHIKI
GDGVQIAAMS GVIGDLPPGE KFGGIPARPL GDFLRDCAQI MGRSEGKSKV GKGQK
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