| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2513 |
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| Symbol | lpxA |
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| ID | 7385878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2073770 |
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| End bp | 2074585 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643651621 |
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| Product | UDP-N-acetylglucosamine acyltransferase |
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| Protein accession | YP_002549809 |
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| Protein GI | 222148852 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase |
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| TIGRFAM ID | [TIGR01852] acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0398278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTTA TTCCAGCCAG TGCCCGCATT CATCCCTCCA GCGTCATCGA AGATGGCGCG
GTGATCGGGG AAAATGTGAC GATAGGACCG TTCTGCCATG TCGGTTCCAA GGTCGTGTTG
GGCGACGGTG CTGAGTTTTT GTCGCATGTG GTGCTGACGG GAAAAACCGT CGTCGGCAAG
AATAGCCGGA TATTTCCCAA TGCGGTTATC GGTGGCGAGC CACAGAGCAT CCATCATTCC
GGCGAAGAGA CAACCTTGAC CATCGGCGAC AATTGCACGA TGCGTGAAGG CGTAACGATC
AATTGCGGCA CGGTAGAAGG TGGCGGACAC ACGGTGGTCG GCAGTAACAA TCTGTTTCTG
GCCAATTCGC ATGTGGCGCA TGATTGTCAG CTCGGCAATC ATATCATTCT ATCCAACAAC
GTGATGTTGG CTGGCCATGT CAAAATCGGT GACCGGGCCA TTCTCGGCGG CGGTTCCGCC
GTTCACCAGT TCACCCGTAT CGGACGACAG GCGTTTATCG GTGGGCTGTC GGCTTGCAGC
TACGATGTCA TTCCCTATGG TATGTTGAAC GGCAATCCCG GCCTGCTGGG TGGATTGAAT
GTGGTCGGCA TGACCCGGGC CGGGGTGGAA CGCGCCACCA TTCACCGCGT CCGCAAGGCC
TATAAGGCAT TGTTCGATGA AGAAGGTGCC ATTCGTGAAA AGGCTGCGGC TATTCGCGAA
GAGTTCGCCG ATTGCGCCGA GGTGATTGAA ATCCTGGATT TCATTGTTGC CGAAAGCGAC
CGGGCGCTCT CGTCGCCATT CCGCGGCAAG AGCTGA
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| Protein sequence | MTVIPASARI HPSSVIEDGA VIGENVTIGP FCHVGSKVVL GDGAEFLSHV VLTGKTVVGK
NSRIFPNAVI GGEPQSIHHS GEETTLTIGD NCTMREGVTI NCGTVEGGGH TVVGSNNLFL
ANSHVAHDCQ LGNHIILSNN VMLAGHVKIG DRAILGGGSA VHQFTRIGRQ AFIGGLSACS
YDVIPYGMLN GNPGLLGGLN VVGMTRAGVE RATIHRVRKA YKALFDEEGA IREKAAAIRE
EFADCAEVIE ILDFIVAESD RALSSPFRGK S
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