Gene Avi_2497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2497 
Symbol 
ID7385862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2057302 
End bp2058375 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content57% 
IMG OID643651605 
Productpossible taurine transport system protein 
Protein accessionYP_002549793 
Protein GI222148836 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR03427] ABC transporter periplasmic binding protein, urea carboxylase region 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.605759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTGT TCTCAAAACT TATTTCTGTT TCTACACTGT CCGTAGCCAT GTCGCTGGGC 
GGACTTATAC CAGCCGATGC CGCGCCCAAG AAGGAGTTCA AGGTCGCCTG GTCGATCTAT
GTCGGCTGGA TGCCCTGGGG CTATGCCAGC GACCATGGCA TCGTCAAGAA ATGGGCCGAT
AAATACGGCA TCAAGATCGA TGTCACCCAG TTCAACGATT ACGTGGAATC GATGAACCAA
TATACCGCCG GTGCCTTCGA CGCGGTCACG CTGACCAATA TGGACGGTCT CTCGATTCCC
GCCGCCGGTG GCGTCGATAC CACGGCGGTG ATCGTCGGCG ACTTTTCCAA TGGCAATGAC
GCGGTTATCC TCAAGGGTAA GGACAAGCTT GCCGATATCA AAGGCCAGAA CGTCAATCTG
GTCGAATTTT CCGTCTCGCA TTATCTCTTG GTGCGGGCGC TGGAGAGCCT TAAACTTACG
GAAAAAGACG TAAAAGTAGT CAACACGTCA GATGCCGACA TGGTCGCCGC CTATAAGACC
GATGACGTGA CCTCGGTCGT CACCTGGAAC CCGCTGGTCT CCACCATCCT CGAAGACCCG
ACCGCCAAAA AAGTGTTCGA CAGCGCGCAA ATCCCCGGCG AAATCATGGA TCTGATGGTC
GCCAATACCG AAGTCCTCAA GGACAACCCG GATTTCGGTA AAGCACTGGC GGGGATCTGG
TATGACACGG TCAAGCTGAT GATGGCCGAC ACAGCAGAGG GCAAGGCCGC CCGCGAGGAG
ATGGGCAAGG CCTCCGGCAC CGACCTCAAG GGCTTTGGCA GCCAGTTGGC CGCCACCAAG
CTGTTCGACA AGGCAGCGGA TGCCAGCACC TTCACCACCT CGCCCGGCCT GCCGAAGACC
ATGGATCTGG TGCGCAATTT CCTGTTTGAA AAAGGCCTAC TGGGTAATGG CGCGCCGTCT
GCCGACGTGA TCGGCATTGA AATGCCTGAC GGTAAGGTGC TGGGCGACAA GGGTAATGTG
AAGTTCCGCT TCACAACCAC CTATATGGAT GCCGCCGCCA AAGGCGCACT CTGA
 
Protein sequence
MRLFSKLISV STLSVAMSLG GLIPADAAPK KEFKVAWSIY VGWMPWGYAS DHGIVKKWAD 
KYGIKIDVTQ FNDYVESMNQ YTAGAFDAVT LTNMDGLSIP AAGGVDTTAV IVGDFSNGND
AVILKGKDKL ADIKGQNVNL VEFSVSHYLL VRALESLKLT EKDVKVVNTS DADMVAAYKT
DDVTSVVTWN PLVSTILEDP TAKKVFDSAQ IPGEIMDLMV ANTEVLKDNP DFGKALAGIW
YDTVKLMMAD TAEGKAAREE MGKASGTDLK GFGSQLAATK LFDKAADAST FTTSPGLPKT
MDLVRNFLFE KGLLGNGAPS ADVIGIEMPD GKVLGDKGNV KFRFTTTYMD AAAKGAL