| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2485 |
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| Symbol | htrA |
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| ID | 7385853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2046490 |
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| End bp | 2047893 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651596 |
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| Product | serine protease |
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| Protein accession | YP_002549784 |
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| Protein GI | 222148827 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGGCC TGAAATCGAT GTCTCCCGCT GTCATCGTCC TTGCATGTCT GGCCGGTTCG
CCGGTACTGG CGCAGGACGC GAAAAGCCTG CCCCAAAGCC GGGCGGATAT GCAGATGTCC
TTTGCCCCTC TGGTCAAGCA GACCCATGGG GCTGTCGTCA ATGTCTATGC CGAGCGGATC
GTCCAGAGCC GCGTCAATCC TTTTGCCGGC GATCCATTCT TCCAGCAATT TTTTGGCCAG
CGGTTTCCCA ACCGCACGGA ACGCCAGACC TCGCTGGGCT CCGGGGTGAT TGTTGAGGCG
AACGGCACGG TGATGACCAA TTTTCACGTC ATCGCAGGGG CAGACGATAT CAAGGTGGCG
CTGTCCGATG GCCGGGAATA TCCGGTGAAA GTTGTTTTGA AGGATGAGCG GCTGGATCTG
GCTGTCTTGA AAATCGACGC TAAGGAAAGT TTGCCGACGC TGAAAATCGC CGATTCGGAT
AAGATCGAGG TCGGCGATCT CGTGCTGGCA ATCGGCAATC CCTTTGGTGT TGGTCAGACG
GTGACCAGTG GCATTGTCTC CGGCCTGGCG CGCAACCAGG TATCGGAAGG CGATTTCGGC
TTCTTCATCC AGACCGATGC GTCGATCAAT CCCGGCAATT CCGGTGGCGC GCTGATGAAT
ATGAATGGCG AGTTGATCGG CTTGAATACC GCGATCTTTT CCAAGGGCGG CGGCTCGAAC
GGCGTTGGTT TCGCCATTCC CGCCAATCTG GTCAAAGTGT TCCTGGAGGC GGCTGACAAG
GGTGCATCAT CGTTCGAGCG GCCTTACGTT GGCGCCACAT TCGAGCCGGT CACGTCAGAT
GTCGCTGACG CACTTGGTCT GAAACAGGTT TTGGGTGCGC TGGTGACGAA GACGGTGGAA
GGCGGCCCGG CAGACAAGGC TGGTATCAAG GCCGGGCAGG TGATTACGGC GGTGGATGGG
GTGATTGTTG AGCATCCCGA TGCCCTAAAC TACCGCCTGA CGACGACAGG CCTTGGTAAG
TCGGTGACTT TGAACGTGAT TGACAATGGC AAGCCCAAGG ACATTACCTT GACGCTGGCC
GGTGCACCGG AGACCCGTCC GCGCGACGAA CAGGTGATCA AGGACAACAG TCCGTTTGAA
GGTGCAACGG TCGGCAATCT GTCGCCACGT CTTGCCTATG AGCTGAAACT GAACACGCAG
ACAAGTGGCG TGGCGATTAC CGCTGTCGCT GATGGTTCGG TTGCGCAGCG GCTTGGCTTC
CAGCCCGGCG ATATCATCGT CTCCATCAAT GGCACCGAGG TTACTTCGTC GCGGGATATG
GTGAAGATCG CGGCAGGCTC GCCCGCCTAT TGGCGGATTG AGATCGATCG CAATGGCCAG
CGGCTGCGGC AGATGTTTCG ATGA
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| Protein sequence | MRGLKSMSPA VIVLACLAGS PVLAQDAKSL PQSRADMQMS FAPLVKQTHG AVVNVYAERI
VQSRVNPFAG DPFFQQFFGQ RFPNRTERQT SLGSGVIVEA NGTVMTNFHV IAGADDIKVA
LSDGREYPVK VVLKDERLDL AVLKIDAKES LPTLKIADSD KIEVGDLVLA IGNPFGVGQT
VTSGIVSGLA RNQVSEGDFG FFIQTDASIN PGNSGGALMN MNGELIGLNT AIFSKGGGSN
GVGFAIPANL VKVFLEAADK GASSFERPYV GATFEPVTSD VADALGLKQV LGALVTKTVE
GGPADKAGIK AGQVITAVDG VIVEHPDALN YRLTTTGLGK SVTLNVIDNG KPKDITLTLA
GAPETRPRDE QVIKDNSPFE GATVGNLSPR LAYELKLNTQ TSGVAITAVA DGSVAQRLGF
QPGDIIVSIN GTEVTSSRDM VKIAAGSPAY WRIEIDRNGQ RLRQMFR
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