| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2484 |
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| Symbol | |
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| ID | 7385852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2045186 |
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| End bp | 2046493 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643651595 |
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| Product | recombination factor protein RarA |
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| Protein accession | YP_002549783 |
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| Protein GI | 222148826 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.669561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATC TGTTTGCCCC GAAGCTGGAT GAGGACATGG CGGCCCGAAG GCCGCTTGCG
GATCGGCTCA GGCCGAAAGC GCTCTCTGAT GTGACGGGGC AAGATCATCT GACCGGGCAG
GACGGTGTTC TGGCCCGGAT GATTGCATCC GGCTCTCTGG GATCGATGAT ATTTTGGGGG
CCGCCCGGCA CTGGCAAGAC CACTGTTGCT CGGCTGCTGT CGGGGGAGGC GGATCTGGCC
TTCGAGCAGA TTTCGGCAAT TTTCTCCGGC GTGGCGGATC TGAAGCGGGT GTTTGAGGGC
GCCCGCGCCC GGCGCATGTC TGGTCGCCAG ACATTGCTGT TTGTCGATGA GATCCATCGC
TTTAACCGCG CGCAGCAGGA TAGTTTCCTG CCGGTCATGG AGGATGGCAC GGTCATTCTG
GTCGGCGCCA CCACGGAAAA TCCGTCTTTC GAGCTGAATG CCGCGCTTTT GTCCCGCGCC
CGCGTGCTGA CCTTCAAGCC GCATGACGAA GAGAGTATCG AGACGCTGCT AAAACGGGCC
GAAGCGACCG AGGAAAAACC TTTGCCGCTG GATGAGCCTG CCCGTACCAG CCTGATCCGC
ATGGCGGATG GCGATGGCCG GGCGGCCCTG ACGCTGGCCG AAGAAGTCTG GCGGGCAGCG
CGCCAGGGAG AGGTCTTCGA TACCGAGGGG CTGACTCGGA TCGTGCAGCG GCGCGCCCCG
GTCTATGACA AGGGGCAGGA CGGCCATTAC AATCTGATCT CGGCGCTGCA TAAATCCGTG
CGCGGCTCGG ACCCGGATGC GGCGCTTTAT TATCTCTGCC GGATGTTCGA TGCCGGGGAA
GATCCGCTTT ATCTCGGCCG CAGGCTGGTG CGTATGGCCG TGGAGGATAT TGGCCTTGCC
GATCCGCAGG CGCTGGTGAT CTGTAACGCC GCCAAGGATG CCTATGATTA TCTCGGCTCG
CCAGAGGGGG AGTTGGCGCT GGCGCAGGCC TGCGTCTATC TCGCCACCGC GCCGAAATCC
AACGCCGTTT ATACCGCCTA TAAGTCCGCT ATGCGCGCCG CCAAGGAAAA TGGCTCGCTG
CTGCCGCCAA AGCACATTCT CAACGCCCCA ACCAAGCTGA TGAAGGGCGA GGGCTATGGG
GACGGCTATC GCTATGACCA CGACGAGCCG GATGCTTTTT CCGGGCAGGA CTACTTTCCA
GAAAAAATGG GCCGCCAGAC CTTTTACGAT CCGCCGGAAC GCGGTTTCGA GCGGGATATC
CGCAAGCGGC TGGACTGGTG GGCAAAGCTG AGGCGGGAGC GCAGTTGA
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| Protein sequence | MSDLFAPKLD EDMAARRPLA DRLRPKALSD VTGQDHLTGQ DGVLARMIAS GSLGSMIFWG
PPGTGKTTVA RLLSGEADLA FEQISAIFSG VADLKRVFEG ARARRMSGRQ TLLFVDEIHR
FNRAQQDSFL PVMEDGTVIL VGATTENPSF ELNAALLSRA RVLTFKPHDE ESIETLLKRA
EATEEKPLPL DEPARTSLIR MADGDGRAAL TLAEEVWRAA RQGEVFDTEG LTRIVQRRAP
VYDKGQDGHY NLISALHKSV RGSDPDAALY YLCRMFDAGE DPLYLGRRLV RMAVEDIGLA
DPQALVICNA AKDAYDYLGS PEGELALAQA CVYLATAPKS NAVYTAYKSA MRAAKENGSL
LPPKHILNAP TKLMKGEGYG DGYRYDHDEP DAFSGQDYFP EKMGRQTFYD PPERGFERDI
RKRLDWWAKL RRERS
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