Gene Avi_2483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2483 
Symbol 
ID7385851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2044645 
End bp2045184 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content58% 
IMG OID643651594 
Producthypothetical protein 
Protein accessionYP_002549782 
Protein GI222148825 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0431097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGGG TTGAGGCAGT CAGCCTTTCC AAAGATCACC TGTTCAGTAA GCAGGGGCGA 
GATGAGATCG TGCTTCTGGC GGGATTGGGT GTGGAAGGCG ACGCTCATCT CGGCGTCACG
GTCCAGCATC GCTCTCGCGT TGCCGCCGAT CCGAGCCAGC CGAACCTGCG CCAGGTTCAT
CTTATTCACG CTGAATTGCT AGGAGAGCTT GGAGATAAGG GTTTTTCGGT GCAGCCGGGA
GATCTTGGCG AGAACATCAC CACAGTTGGA GTCGATCTTC TTGCGCTGCC GCAAGGAACC
CGCCTGCATT TTAGCTCAGG TGCGGTGGTC GAGGTGACGG GTCTTCGCAA TCCCTGCAAA
CAGATCAATA ATTTTCAGCC GGGCTTGATG CAGGCGGTGC TGGACCGAGC CTCGGACGGT
AGCCTGATCC GCAAGGCAGG CGTCATGGCA ATTGTCATTG AAGGTGGCGT GGTGCGTCCG
GGTGATAGTA TCCGTGTCGA GCAACCCGGC GCTCCGCATC GGCCTCTGTT GCCGGTCTAA
 
Protein sequence
MMRVEAVSLS KDHLFSKQGR DEIVLLAGLG VEGDAHLGVT VQHRSRVAAD PSQPNLRQVH 
LIHAELLGEL GDKGFSVQPG DLGENITTVG VDLLALPQGT RLHFSSGAVV EVTGLRNPCK
QINNFQPGLM QAVLDRASDG SLIRKAGVMA IVIEGGVVRP GDSIRVEQPG APHRPLLPV