Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2483 |
Symbol | |
ID | 7385851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2044645 |
End bp | 2045184 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643651594 |
Product | hypothetical protein |
Protein accession | YP_002549782 |
Protein GI | 222148825 |
COG category | [S] Function unknown |
COG ID | [COG2258] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0431097 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAGGG TTGAGGCAGT CAGCCTTTCC AAAGATCACC TGTTCAGTAA GCAGGGGCGA GATGAGATCG TGCTTCTGGC GGGATTGGGT GTGGAAGGCG ACGCTCATCT CGGCGTCACG GTCCAGCATC GCTCTCGCGT TGCCGCCGAT CCGAGCCAGC CGAACCTGCG CCAGGTTCAT CTTATTCACG CTGAATTGCT AGGAGAGCTT GGAGATAAGG GTTTTTCGGT GCAGCCGGGA GATCTTGGCG AGAACATCAC CACAGTTGGA GTCGATCTTC TTGCGCTGCC GCAAGGAACC CGCCTGCATT TTAGCTCAGG TGCGGTGGTC GAGGTGACGG GTCTTCGCAA TCCCTGCAAA CAGATCAATA ATTTTCAGCC GGGCTTGATG CAGGCGGTGC TGGACCGAGC CTCGGACGGT AGCCTGATCC GCAAGGCAGG CGTCATGGCA ATTGTCATTG AAGGTGGCGT GGTGCGTCCG GGTGATAGTA TCCGTGTCGA GCAACCCGGC GCTCCGCATC GGCCTCTGTT GCCGGTCTAA
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Protein sequence | MMRVEAVSLS KDHLFSKQGR DEIVLLAGLG VEGDAHLGVT VQHRSRVAAD PSQPNLRQVH LIHAELLGEL GDKGFSVQPG DLGENITTVG VDLLALPQGT RLHFSSGAVV EVTGLRNPCK QINNFQPGLM QAVLDRASDG SLIRKAGVMA IVIEGGVVRP GDSIRVEQPG APHRPLLPV
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