Gene Avi_2479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2479 
Symbol 
ID7387175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp2041970 
End bp2042551 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content59% 
IMG OID643651591 
Producthypothetical protein 
Protein accessionYP_002549779 
Protein GI222148822 
COG category[S] Function unknown 
COG ID[COG4929] Uncharacterized membrane-anchored protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCAGC GCAATCATAT TTTTCGTCTG GTTTCCGCGG CGATTCTTCT GGCTGCCCTG 
CAAACGGCGG CGATCGGCTA CCAGATTGGC GAGCGGGCCA ATATTTTGCG CAACGGCCAG 
GAGGTCCTGC TGCGGACCGA GGCGGTCGAT CCGCGCGATC TGCTGCGCGG CGATTTTGTC 
GTGCTGAATT ATCCGATTTC CCGCATTCCT GAAGAGAAGA TCATCGGTCC TCGTCCATCA 
AGCCGACAGG ATGTGCGTCT GCATGTCCGT GTCGTGCCGC AGGCCGATGG CTTTGCCACG 
GTCGAAGAGG CGTCGGTCGC CGATCTGCCG GCAAAGCCGG GAAGCGTCGT GCTGTTAAGC 
GAACCGCTGT CCTTTCCATC GCCTCTGGCG CCCGGAGACA GTTTGACCGT CCATTACGGG 
ATCGAGCGAT TCTATGTCCC TGAAGGCGAG GGCCGCGATA TCGAGGCACA GCGTAATCAA 
GGTGCGGTTT CAATCGCCAT ACGGGTGTCT CATGCGGGAC GGGCGCAGAT CCGGCAATTG 
TTCGTTGCGG GCCAGCCGGT TTATCGGGAA CCGGATTTTT GA
 
Protein sequence
MMQRNHIFRL VSAAILLAAL QTAAIGYQIG ERANILRNGQ EVLLRTEAVD PRDLLRGDFV 
VLNYPISRIP EEKIIGPRPS SRQDVRLHVR VVPQADGFAT VEEASVADLP AKPGSVVLLS 
EPLSFPSPLA PGDSLTVHYG IERFYVPEGE GRDIEAQRNQ GAVSIAIRVS HAGRAQIRQL 
FVAGQPVYRE PDF