| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2467 |
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| Symbol | dksA |
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| ID | 7385838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2029988 |
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| End bp | 2030428 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651580 |
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| Product | RNA polymerase-binding protein DksA |
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| Protein accession | YP_002549769 |
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| Protein GI | 222148812 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1734] DnaK suppressor protein |
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| TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTCTTCA GGAGAATCGC GTTGAGTGAG AAGATCAATC TTAGCGACTA TGTGCTCTCG
GATGACGACG AGTTCATGAA CGCGAACCAG CGAGCTTATT TTCGCGCCAA GTTGATCGCT
TGGAAAAACG ACATCCTGCG TGAGGCAAGG GAAACCCTCG GCCATCTCGC GGAAGAGAGT
GCCAATCACC CTGACCTGGC AGACCGGGCA TCTTCGGAAA CCGACCGCGC AATCGAGCTT
CGGGCGCGTG ACCGGCAGCG CAAGCTGATC TCCAAGATCG ATGCTGCATT GCAACGGATC
GACGATGGCA CCTACGGCTA TTGCGAGGAA ACCGGCGAGC CAATCGGCTT GAAGCGCCTC
GACGCCCGCC CGATCGCGAC CCTGTCAATC GAGGCGCAGG AACGCCACGA GCGACGCGAA
AAAGTCTATC GCGACGAATA G
|
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| Protein sequence | MFFRRIALSE KINLSDYVLS DDDEFMNANQ RAYFRAKLIA WKNDILREAR ETLGHLAEES
ANHPDLADRA SSETDRAIEL RARDRQRKLI SKIDAALQRI DDGTYGYCEE TGEPIGLKRL
DARPIATLSI EAQERHERRE KVYRDE
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