| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2456 |
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| Symbol | |
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| ID | 7386080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2019186 |
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| End bp | 2021477 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651573 |
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| Product | dehydrogenase |
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| Protein accession | YP_002549762 |
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| Protein GI | 222148805 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATAG TGACAGCACG CAAGCACGGC GATGCCGCCG ATGGTGCGGT CGGTGGCCGT
CTTTCACGGT TCGAAGGACA GAGAAAAATC ACTGGGGCTG CCACCTATGC GCTGGAATAT
CCGGTGGAAA ACCCTGCCCA TGCGGTGCTG GTGCAGAGCA CGATCGCGTC CGGTCGGGTG
GTGTCTGTTG ATACATCCGC AGCGAACGCT GCACCGGGCG TATTGATGGT GCTGACGCCG
CAGGACGATC TCGGTCTGAT CACTGCGTCT GATTGGTACG GAAATCGGCC CGATAACCAG
CCCTATTATC CCTTGTCGAA TATAGTAACC TTCAATGGTC AATTGATTGC AGCGGTCATC
GCCGAAAGCC GGGAACAAGC AGCCGAAGCA GCCAAGCTGG TTCGTGTAGT CTATGAAGAA
TCCACTGCAA TCAATGGACT AGACGATCCA AATGCTGGTT CAGGCAAGCT GATGGATAAT
CTGAATGTTT CGTGGGGTGA TGCCGAGGCG GCGCTGGCAG CGTCCGCAGT GCGCATCGAG
GCTGAATATC GGACCCCGCG CGAATACCAT GTCGCTATGG AACCCCATGG CCTGACCGCC
CAATGGGACG AGGACCGGTT GACGCTTTGG GAGCCGAGCC AATGGACCCA CGGCATGGCA
CGCAGCTACG CTGAATGGTT CGGCCTGCCG CTGGAGAATG TCCGTATCGT CTCACCGTTT
ATTGGTGGCG GTTTCGGTTC CAAGGGCGGA GCGCTGGCCT ATGGCGCGGT GGCAGCAGCA
GCGGCGAAAA AGCTGCGCCG TCCCGTCAAA CTGGCCGTCA CCCGGCCCCA GAATTTCACC
AGTTACGGCG GACGTGCCGC GACGCGCCAA ACCATCGCCT TGGGCGCAAC CCAGGACGGG
ATTTTACAGG CAATCCTTCA TCGCGGTGCC AGTGAGACAT CCACCTACAT GGACTATCCT
GAGCAGACCG GCGCTGCGAC ACCGATTCTT TACAAGGTGG AGAATTTCAG TTCCGAGCAT
CGCGTCGTGC CGGTTAATAC CGTGACACCA GGCGCTTTGC GGGGGCCGGG CAAAAATCCC
AGCGCCTTCG GCATTGAATG CGCCATGGAC GAACTGGCCG CTGCCATCGG TATGGACCCC
CTGGAAATAC GCCTGAAAAA CTATGCCGAC CGCGATTATC AATCGGGCAA GCCGTGGTCC
ACGCGCCAAT TGCGCGAGGC CCTCACCCAG GGTGCCGAGG CTTTCGGCTG GTCACGGCGC
AGTGCTCAAC CCCGGACCAT GCGCGACGGA CGCCAACTGA TCGGCTGGGG TATCGGCTGC
GGCACGTTTC CAGTCATCCG CGCGCCAAGC GAAGCGATGA TCCGCATTCT GGCGAACGGG
CGGGTTGAGG TTGTCAGTGG CGCCATAGAC ATGGGACAGG GTACCTATAC AATCCTTGCC
CAGACCGCTT CCGAAGCGCT GGGCGTGCCT GTCGAGCAGA TTGACGTTGT GCTTGGCGAT
TCCAGGCTGC CGGGATCGGC TATTGCCGGT GGGTCGATGT TGGCCGGGTC GATCACTGGC
GCTGTCCACA AGGCAGCATT GGCCGCCCGT GACGAAATAC TGGCGCTAGC CCTTAACGAC
GCCAATTCGC CATTCCGCGA GACCGGCGCC AATATTTTGA CATTGAGCGA TGGCCGGATT
GCCATGTCAC GCGGCGAGGG GCCTTCGATC ACCCTACCCG AGCTGATGAC AGCCCTGAAC
CGCGATGAGA TTGAAGTGCG GCGCAATACG TTGCCCGATG ATGCCCAAAG CGCCGCCGAC
CACAAGGGCG CCTGGACCAG CATGGCAAGA GTGCAAGGCC CGACCATGGG CGACACGTCC
ATGCACAGCT GGTGCGCTCA CTTCGTCGAA GTTCGGGTCG ATGAGGATTT CGGCACGGTC
CGGGTCTCGC GCATGGTTTC CGCCTTCGAT TGCGGACGGC TTTACAATCC GAAAATGGTG
GAAAGCCAGT GGCGAGGCGG CATCATCATG GGCATCGGCC AGGCTTTGCT GGAGGAGGGG
CTGGTGGACA GCCGCAACGG GCGCGTCGTT AACAATAATA TGGCGGATTA TCTCGTGCCG
ACCAATGCTG ACATTCCCGA TATCCAGGTG ATTTCAGTGG GCATACCTGA CTATGAAGCC
TCTGCGCTTG GCGGCAAAGG GGTCGGCGAA GTCGGGATTG TCGGTGTCGC GCCCGCTATC
GCCAATGCTG TCTTCCATGC CACCGGCAAG CGTGTCCGCG ATCTGCCGAT CACTCTGGAA
AAGCTCATCT GA
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| Protein sequence | MTIVTARKHG DAADGAVGGR LSRFEGQRKI TGAATYALEY PVENPAHAVL VQSTIASGRV
VSVDTSAANA APGVLMVLTP QDDLGLITAS DWYGNRPDNQ PYYPLSNIVT FNGQLIAAVI
AESREQAAEA AKLVRVVYEE STAINGLDDP NAGSGKLMDN LNVSWGDAEA ALAASAVRIE
AEYRTPREYH VAMEPHGLTA QWDEDRLTLW EPSQWTHGMA RSYAEWFGLP LENVRIVSPF
IGGGFGSKGG ALAYGAVAAA AAKKLRRPVK LAVTRPQNFT SYGGRAATRQ TIALGATQDG
ILQAILHRGA SETSTYMDYP EQTGAATPIL YKVENFSSEH RVVPVNTVTP GALRGPGKNP
SAFGIECAMD ELAAAIGMDP LEIRLKNYAD RDYQSGKPWS TRQLREALTQ GAEAFGWSRR
SAQPRTMRDG RQLIGWGIGC GTFPVIRAPS EAMIRILANG RVEVVSGAID MGQGTYTILA
QTASEALGVP VEQIDVVLGD SRLPGSAIAG GSMLAGSITG AVHKAALAAR DEILALALND
ANSPFRETGA NILTLSDGRI AMSRGEGPSI TLPELMTALN RDEIEVRRNT LPDDAQSAAD
HKGAWTSMAR VQGPTMGDTS MHSWCAHFVE VRVDEDFGTV RVSRMVSAFD CGRLYNPKMV
ESQWRGGIIM GIGQALLEEG LVDSRNGRVV NNNMADYLVP TNADIPDIQV ISVGIPDYEA
SALGGKGVGE VGIVGVAPAI ANAVFHATGK RVRDLPITLE KLI
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