| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2453 |
|---|
| Symbol | |
|---|
| ID | 7386077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 2016588 |
|---|
| End bp | 2017343 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643651570 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002549759 |
|---|
| Protein GI | 222148802 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2129] Predicted phosphoesterases, related to the Icc protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.187764 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATTT TTGTCGGATC GGATTTTCAC GCAGACCATC AGGAGAACAT GGACTGGCTC
CGGCAGATCT CGACGCACGA CTACCGGCAG GACGTGCTGA TCGTTGCCGG AGACGTTGCA
AACGGCATGG CGCTGTTTCA GACAGTCATG GAACTCCTGG CCCAGCGATT TTTCAAGGTT
CTATATGTGC CGGGCAATCA CGATCTATGG GTTGATGCCG AAGGGCAGGG CTCATCCTTC
GACAAGTTCC AGCGGCTGAA AGCCGCCTGC GCCGATCTGG ATATCGGCAT GGAACCATTG
GCACTCGGCA ACACGCTGAT CGTCCCGCTG CTGGGCTGGT ACGATTACTC TTTCGGTCCG
CCCGGCTCCA TCCTCAAACA GGCCTGGATG GATTACCGCC GCTGTGATTG GGAAGGCGGT
TCCGATGATG AGGTCAGCCG GTATTTTGAC AGTGGCAATG CGGAACCAGA TACATCAGGG
TTTTCATCGA TCCTGTCTTT TTCGCATTTC CTGCCACGCA TCGATCTGAT GCCGGAGCGT
ATGCCGGAAA AATACCGATT CCTTTATCCA GTGCTTGGCT CCAGCCGGTT GGAAGACAGG
ATCGCGGCTC TCGGCTCCCA CCTGCATATC TACGGTCACA GCCATCTCAA CCGCCGTATC
ATCAAGGACG GACGTACCTA TATCAACAAC GCCTTCGGCT ATCCTTCGGA GCGCCACATT
GCTGCAAGGA TGCTGATGCA AGTGGGTGAT GTCTAG
|
|---|
| Protein sequence | MRIFVGSDFH ADHQENMDWL RQISTHDYRQ DVLIVAGDVA NGMALFQTVM ELLAQRFFKV
LYVPGNHDLW VDAEGQGSSF DKFQRLKAAC ADLDIGMEPL ALGNTLIVPL LGWYDYSFGP
PGSILKQAWM DYRRCDWEGG SDDEVSRYFD SGNAEPDTSG FSSILSFSHF LPRIDLMPER
MPEKYRFLYP VLGSSRLEDR IAALGSHLHI YGHSHLNRRI IKDGRTYINN AFGYPSERHI
AARMLMQVGD V
|
|---|
| |