Gene Avi_2445 details

Gene Information

• Locus tag: Avi_2445
• Symbol: coaD
• ID: 7386071
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 2011967
• End bp: 2012461
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643651564
• Product: phosphopantetheine adenylyltransferase
• Protein accession: YP_002549753
• Protein GI: 222148796
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0669] Phosphopantetheine adenylyltransferase
• TIGRFAM ID: [TIGR00125] cytidyltransferase-related domain; [TIGR01510] pantetheine-phosphate adenylyltransferase, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAATTG CCTTTTATCC GGGCTCTTTC GACCCGATGA CCAATGGCCA CCTGGATGTC 
CTGGTTCAGG CGCTCAATGT CGTTCCCAAG GTTGTCGTCG GGATCGGCAT TCATCCCGGC 
AAAGTGCCGA TGTTCAGCTT CGAGGAGCGC GCAGAACTGA TTGCGACCAG CCTTGGAGAG 
GCTGTACCTT TGCGGGCAGG GGATGTCTCG GTCATCGCTT TCGATGGTCT GGCCGTCGAT 
GCCGCCCGCC AGCATGGGGC GACGCTTCTG GTTCGCGGCC TGCGTGATGG GTCGGATCTC 
GACTATGAAA TGCAGCTTGC GGGCATGAAC CGGCAGATGG CGCCAGATCT GCAAACAGTC 
TTCTTGCCAG CCGGCACGGC TTCGCGGCCC ATAACGGCCA CATTGGTCCG GCAAATCGCC 
ACCATGGGCG GTGATGTCAG CGCCTTTGTC CCCCCGCAGG TGTCGCGGGC ATTGAAATCC 
CGGCTCAAAA CCTGA 

 

Protein sequence

MTIAFYPGSF DPMTNGHLDV LVQALNVVPK VVVGIGIHPG KVPMFSFEER AELIATSLGE 
AVPLRAGDVS VIAFDGLAVD AARQHGATLL VRGLRDGSDL DYEMQLAGMN RQMAPDLQTV 
FLPAGTASRP ITATLVRQIA TMGGDVSAFV PPQVSRALKS RLKT