Gene Avi_2433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2433 
Symbol 
ID7386062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp2002418 
End bp2003095 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content58% 
IMG OID643651555 
Producthypothetical protein 
Protein accessionYP_002549744 
Protein GI222148787 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0301699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGAAG TCATTTTCAA CGGACCCGCA GGACGTCTAG AGGGCCGCTA CCAGCCCTCC 
AAGGAAAAGA GCGCCCCGAT TGCGATCATC CTGCATCCGC ATCCGCAATT TGGCGGCACG 
ATGAACAATC AGATCGTTTA TCAGTTGTTC TACATGTTCC AGAAGCGTGG TTTTACCACC 
CTGCGCTTCA ACTTCCGCAG CATTGGCCGT AGCCAGGGTG AATTCGACCA CGGCGCCGGC 
GAATTGTCCG ATGCGGCCTC GGCGCTGGAT TGGGTGCAGA GCCTGCATCC CGATTCGAAG 
AGCTGTTGGG TTGCCGGCTA TTCCTTCGGC TCGTGGATCG GCATGCAGCT GTTGATGCGC 
CGCCCGGAAA TCGAAGGATT CATTTCGGTT GCGCCGCAGC CGAATACCTA TGATTTCTCC 
TTCCTCGCCC CCTGCCCTTC GTCGGGTCTG ATTATCCATG GCGACGCCGA CAAGGTTGCG 
CCGGAAAAGG ACGTTCAAGG ACTGGTAGAC AAGCTGAAGA CTCAGAAGGG TATTCTGATC 
ACCCAGAAGA CCTTGCCCGG CGCCAACCAT TTCTTCAATG GTCAGGTCGA AACGCTGATG 
GGCGAATGCG AGGATTATCT CGACCGCCGC CTTGAAGGCG AATTGGTGCC GGAACCGGCT 
GCCAAGCGGC TGCGCTGA
 
Protein sequence
MPEVIFNGPA GRLEGRYQPS KEKSAPIAII LHPHPQFGGT MNNQIVYQLF YMFQKRGFTT 
LRFNFRSIGR SQGEFDHGAG ELSDAASALD WVQSLHPDSK SCWVAGYSFG SWIGMQLLMR 
RPEIEGFISV APQPNTYDFS FLAPCPSSGL IIHGDADKVA PEKDVQGLVD KLKTQKGILI 
TQKTLPGANH FFNGQVETLM GECEDYLDRR LEGELVPEPA AKRLR