Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2412 |
Symbol | |
ID | 7386045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1984301 |
End bp | 1984954 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643651538 |
Product | putative sulfite oxidase subunit YedZ |
Protein accession | YP_002549727 |
Protein GI | 222148770 |
COG category | [S] Function unknown |
COG ID | [COG2717] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00136958 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGATCATGG CCTCTTTCAG TCTCTCCGCA CGGCAAAAAT CGCTCTCCAT CTGGGCGCTT TATGCCTTTG GCCTCATGCC TGGCCTCTAC GCTTTCTATC TTGGCGTTTT CGGCGATCTC GGCGCCGATC CGGTGCGTGA ATTCGAGCAT CGTCTCGGGC TCTGGGCCTT GCGGTTCCTC TGTCTGGGGC TGGCGATAAC GCCGCTGCGC GATCTGGCAA AATACAATTT CATCGCCTAT CGCCGGGCGC TGGGACTTCT GGTGTTCTAC TATGTTCTGG CCCATTTTGC CGTCTATCTG ACGCTGGACA GAGGCCTGAT TCTCTCGTCC ATTCTCGGGG ACATCCTGAA ACGGCCCTAT ATCATGCTTG GCATGTTGGG TCTCATCCTG CTTATTCCGC TGGCGCTGAC CTCCAATCGC TGGTCGATCC GCAAGCTTGG CAGCCGCTGG AACACGCTGC ATAAGGCGAG CTATATCATT CTGGCCGCAG GGCTTTTGCA TTTCGTCCTG TCGCGTAAGT CCTTCACGCT GGAGCCAGCG ATCTATACCG GCATCGTTAT CCTGTTGCTT GGTTACCGGC TGGTACGTCC AAGGCTGATG GCGGCGAAGC GCAAAAAGGC GGCGCTGGCC AAGGCGGCAA CGCGAACCGC TTAA
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Protein sequence | MIMASFSLSA RQKSLSIWAL YAFGLMPGLY AFYLGVFGDL GADPVREFEH RLGLWALRFL CLGLAITPLR DLAKYNFIAY RRALGLLVFY YVLAHFAVYL TLDRGLILSS ILGDILKRPY IMLGMLGLIL LIPLALTSNR WSIRKLGSRW NTLHKASYII LAAGLLHFVL SRKSFTLEPA IYTGIVILLL GYRLVRPRLM AAKRKKAALA KAATRTA
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