Gene Avi_2408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2408 
Symbol 
ID7386041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1977564 
End bp1978595 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content58% 
IMG OID643651534 
Producthypothetical protein 
Protein accessionYP_002549723 
Protein GI222148766 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTGGC AACCGGCTGA AAACCGCTAT GAGCGGATGA CCTATAATCG TTGCGGCAAG 
AGCGGGCTGA AATTGCCAGC GATCTCGCTT GGTCTCTGGC ATAATTTTGG CGATGACACG
CCGCATCAGT TGAAGCGGGA CATGTGCCGC CGCGCCTTTG ATCTCGGCAT TACCCATTTT
GACCTTGCCA ACAATTATGG CCCTCTGCCG GGTGCCGCGG AACTGGCCTT CGACGAAATC
CTCAAAACGG ATTTTCATGG ACTGCGTGAC GAGCTGATCG TCTCGTCAAA GGCCGGATAC
AATATGTGGC CCGGTCCTTA CGGCGAATGG GGCAGCCGCA AATATCTCAT CTCATCCTGC
GACCAGAGCC TGAAGCGCAT GGGTCTGGAC TATGTGGATA TTTTCTATTC CCACCGTTTC
GACCCTGACA CACCGCTGGA GGAAACCTGC GGCGCGCTCG ATCATATCGT CCGTTCGGGC
CGGGCGCTCT ATGTCGGGAT TTCCTCCTAT AATTCGCAGC GAACCCGCGA AGCGGTCGAG
ATCATGAAGG GCCTCGGCAC GCCGCTGCTG ATCCATCAGC CGAGCTATTC GATGCTCAAT
CGCTGGGTGG AGGATGACAA GCTGCTCGAT ACGCTTGAGG ATGTCGGCAT GGGCTCCATC
GTGTTTTCGC CATTGGCGCA GGGCATGCTG ACCACCAAAT ATCTCCAGGG CATTCCCGAG
GACAGCCGTG CTGCCCAGAA CCACTTCCTG AAGCGCGAGT TCATTCGTCC TGAGATCATC
GAAAACATCC GCAAGCTGAA CGCGATTGCC GAAAAGCGCG GCCAAACGCT GGCGCAGATG
GCGATTTCCT GGGTGCTGCG CGGTGGTCGC GTCACGTCTG CCCTGATCGG CGCCAGCCGC
GTGTCGCAGA TCGAGGATTG CGTCAAGGCG CTGGACACGC CGGACTTTAC CGAGGCGGAA
CTGGCCGAGA TCAACGTCTA TGCCAAGGAA GCCGATATCA ATCTCTGGGC GAAATCCGCC
GAGCGTGATT GA
 
Protein sequence
MTWQPAENRY ERMTYNRCGK SGLKLPAISL GLWHNFGDDT PHQLKRDMCR RAFDLGITHF 
DLANNYGPLP GAAELAFDEI LKTDFHGLRD ELIVSSKAGY NMWPGPYGEW GSRKYLISSC
DQSLKRMGLD YVDIFYSHRF DPDTPLEETC GALDHIVRSG RALYVGISSY NSQRTREAVE
IMKGLGTPLL IHQPSYSMLN RWVEDDKLLD TLEDVGMGSI VFSPLAQGML TTKYLQGIPE
DSRAAQNHFL KREFIRPEII ENIRKLNAIA EKRGQTLAQM AISWVLRGGR VTSALIGASR
VSQIEDCVKA LDTPDFTEAE LAEINVYAKE ADINLWAKSA ERD