| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2405 |
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| Symbol | manA |
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| ID | 7386038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1972806 |
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| End bp | 1975253 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651531 |
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| Product | beta-mannosidase precursor |
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| Protein accession | YP_002549720 |
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| Protein GI | 222148763 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATA TCCACGACCT TGCCGGCCCC TGGCAGCTTT CCACCGTAAA CGGTGAACAC
GCCTGCACCA TCACCTTGCC CGGCGACGTG CATAGCGCGC TTCATGCGGC AGGCATGATT
GCCGATCCTT ATTTCGCCAG GAATGAGGAA CAGGTGCAAT GGGTGGCCGA AAGCGATTGG
GTGCTGGTGC GCAGCTTCCA TCTCGATGTG GCCGATGCGG ACTGGTATCT GGACATCGAC
AATCTCGACA CCGTCGCCAT GGTGTTCATC AATGACATCC CGGTACTGTC TGCCGACAAT
TGCTTCCGGC GCTACCGCCC GGATGTCAGC GCCGCCTTGC AGCCGGGCGA AAATACCATT
CGCATTGTCA TCCATTCCAG CATCAAGGCA GGGGCTGAGC GGCAGGCGCG CCAGCCCTTT
TACGTGCCTT ACCATCCCGG CAATTCGCCG ATTCCGCACG GTAACATGCT GCGCAAGCCG
CAATGCCATT TCGGCTGGGA CTGGAATATC GCCATCGCGC CGCTTGGCGT CTATGGCACC
ATTGCCATCC GCAAACTGGA CCCGGCGCGA ATCGAGCATG TCGAAACCAG CCAGCTGCAC
CATGCCGATG GCCGGGTGGA GCTGACGGTC AAGGCAACGA TCTTTGCCAA GACCCCATCG
GTGGTGCCGG TGCATTTCCA GCTGGAGGAC GAGCGGCTGC GGCTGGACTG CGGCGTCAAT
GCCGGGGAAA CGGTCATTAC CCATGTGTTC GAGATTGAAA ATCCTCGGCT ATGGTGGCCA
GCGGGCAGCG GCGAGCAGGC GCTTTATGCC CTTAGCCTAG ACGTGCCGGG CTATACAGTC
GAAAAGCTGA TCGGCCTGCG GGTCATCGAA CTGCTGACCG ATGCGGATGA GGCGGGCAGC
CGGTTTGCGT TCAAGGTCAA TGGTCGGGAG ATCTTCTGCC GGGGCGCCAA CTGGATTCCC
GCCGATGCGC TGTTTTCGCG TTCGTCGCTT GAAAAAACCA AGGGCTTGCT GGACTCGGCG
GTCGCGGCCC ATATGAACAT GATCCGTGTC TGGGGTGGCG GTTTTTACGA GGCCGACTGG
TTCTATGATC TGTGTGACCG CTTGGGCCTG CTGGTCTGGC AGGACTTCAT GTTTGCCTGC
AATCTCTATC CCTGTACCGA TGATTTCCTC GATAATGTCG CAGCTGAAGT CGATTATCAG
GTCCGTCGCC TGCAATCGCA TCCGTCCATT GCGCTCTGGT GCGGCGACAA TGAATTGATG
GGGGCGCTGA CCTGGTTTGA CGAAAGCCGT GATAATCGTG ACCGCTATCT GGTTGCCTAT
GACCGGCTGA ACCGGGTGAT CGAGCAGGGG GTCAAAAAGA CCTTTCCGCA AGCCATCTGG
TGGCCCTCCA GCCCCGCCTC CGGCTATCTC GACTATGGCG ATGCCTGGCA CGCCGATGGC
TCCGGCGATA TGCATTACTG GTCGGTCTGG CACGAGAACA AGAGCTTCGA CAATTACCGA
AGCGTCAAGC CGCGCTTCTG CTCGGAATTC GGTTTCCAGT CCTATACGTC ATTGCCTGTC
ATCGAGAGCT TTGCCGAGGC AAAGGACATG AATATCGCCT CGCCGGTCAT CGAGCTACAC
CAGAAGAATG CAGGTGGTAA TGAGCGGATT GCAGGGACCA TATTCCGCTA TTTCCGCTTC
CCGAAAGATT TCGCCAATTT CGTCTATCTC AGCCAGATCC AGCAGGGCCT GGCAATCAAG
ACGGCGGTGG ACTATTGGCG CTCGCTGAAG CCGCATTGCA TGGGTACGCT GTATTGGCAG
CTCAACGATA CCTGGCCTGT CGCCTCCTGG GCGAGCCTGG ATTATGGCGG GCGGTGGAAG
GCCATGCATT ATATGGTCAA GCGCTTCTTC CAGCCGGTGG CCATTGCCGC CATCCCGGAT
GAAACGGGCA AGCGACTGCA GTTCTCCATG GTCAATGACA CGGCTGACAG TGTCGATATC
GATTTGACCG TGTTTGCGCT GACATTGTCT GGTGAGCGCC GGACACTGAT GACGGCAAGC
GGATCATGTT CACCTGACCG GGCAGAGATT TTGAGTTCCA TTGAACTATC AGATGTCCCA
GGTAATGGAC TGATAATATG GGATTTCAAG GCATCCAATG GCATGAAAGG CGAGGGCCAT
TTTGTGTCAG GCGGCGCTTA CAAAAGCCTG GAACTGGAAC CATCGGGTCT TGAGCTAAAG
GCCATGCCAC AGGCCGATGG TTCTTTCGAA TTGACGGTCA CGGCCTCCGG TCTTGCGCTG
TTCGTGATGA TCGAAAGCCG CCTCGACGGG AGCTACAGCG ACAACGCCTT CGACCTGACC
GCCGGTGAAA GCCGCCGTGT GACCTTCACC CCAGCCACTC CGCTGCCGCC GGGCGAAGTG
CCTGATTTCA CTCTTTACGA TCTCTATTCC TGCCAAACCG CCGACTAA
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| Protein sequence | MTDIHDLAGP WQLSTVNGEH ACTITLPGDV HSALHAAGMI ADPYFARNEE QVQWVAESDW
VLVRSFHLDV ADADWYLDID NLDTVAMVFI NDIPVLSADN CFRRYRPDVS AALQPGENTI
RIVIHSSIKA GAERQARQPF YVPYHPGNSP IPHGNMLRKP QCHFGWDWNI AIAPLGVYGT
IAIRKLDPAR IEHVETSQLH HADGRVELTV KATIFAKTPS VVPVHFQLED ERLRLDCGVN
AGETVITHVF EIENPRLWWP AGSGEQALYA LSLDVPGYTV EKLIGLRVIE LLTDADEAGS
RFAFKVNGRE IFCRGANWIP ADALFSRSSL EKTKGLLDSA VAAHMNMIRV WGGGFYEADW
FYDLCDRLGL LVWQDFMFAC NLYPCTDDFL DNVAAEVDYQ VRRLQSHPSI ALWCGDNELM
GALTWFDESR DNRDRYLVAY DRLNRVIEQG VKKTFPQAIW WPSSPASGYL DYGDAWHADG
SGDMHYWSVW HENKSFDNYR SVKPRFCSEF GFQSYTSLPV IESFAEAKDM NIASPVIELH
QKNAGGNERI AGTIFRYFRF PKDFANFVYL SQIQQGLAIK TAVDYWRSLK PHCMGTLYWQ
LNDTWPVASW ASLDYGGRWK AMHYMVKRFF QPVAIAAIPD ETGKRLQFSM VNDTADSVDI
DLTVFALTLS GERRTLMTAS GSCSPDRAEI LSSIELSDVP GNGLIIWDFK ASNGMKGEGH
FVSGGAYKSL ELEPSGLELK AMPQADGSFE LTVTASGLAL FVMIESRLDG SYSDNAFDLT
AGESRRVTFT PATPLPPGEV PDFTLYDLYS CQTAD
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