| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2402 |
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| Symbol | |
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| ID | 7386036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1970579 |
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| End bp | 1971532 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643651529 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002549718 |
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| Protein GI | 222148761 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAGGGCG CAAGCGTGGC TGATCGTTCC ATTATCAAAC CTTCGGATTT CAAAAACACC
GAAAAGCGCC TGAGAGATGG GCCTCAGGGT GCCAAGCCAA AACGTACGCT TTCACCGCGC
AACATCATAC TCTATGGCAT TCTGTTTGTG GCGGCTACCT ACTATCTCTT GCCGCTTTAC
GTGATGGTGG TGACCTCGCT GAAGGGTATG CCGGAAATCC GCATGGGCAA TATCTTTTCG
CCGCCTGTGG AAATCACCTT TGAACCATGG GTGAAAGCGT GGAGCCAAGC CTGCACGGGT
CTGAATTGCG ATGGCCTGTC GCGTGGGTTC TGGAATTCGG TGCGTATTAC CGTTCCCTCA
ATGCTGATCT CGATCCTGAT TGCTTCTGTC AGCGGCTATT CGCTCGCCAA CTGGCGGTTC
AAAGGGGCCA ATCTGTTTTT CGCGGTGCTG GTTGTGGGGG CCTTCATTCC CTATCAGGTG
ATGATCTATC CGATTGTCAT TATCTTACGT GAAGCGGGCA TCTATGGCTC GCTGTCTGGG
CTGGTGATTG TGCACACCAT CTTCGGAATG CCGATCCTGA CGCTGCTGTT TCGCAATTAC
TTCTCCTCGC TGCCCGAGGA ATTGTTCAAG GCTGCCCGGG TGGATGGGGC AGGGTTCTGG
CAAATCTATT TCCGCATCAT GCTGCCCATG TCGCTGCCGA TCTTCGTTGT GGCGATGATC
CTTCAGGTCA CGGGCATCTG GAATGATTTT CTGTTCGGCG TGGTGTTCAC CCGGCCTGAA
TATTACCCGA TGACGGTGCA GCTCAACAAT ATCGTCAATT CGGTTCAGGG CGTGAAGGAA
TACAACGTCA ACATGGCCGC AACGATTTTA ACGGGCGCCG TTCCCCTGAT TATCTATTTC
GTCTCTGGGC GCCTGTTTGT GCGCGGTATC GCCGCTGGCG CTGTGAAGGG GTAA
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| Protein sequence | MEGASVADRS IIKPSDFKNT EKRLRDGPQG AKPKRTLSPR NIILYGILFV AATYYLLPLY
VMVVTSLKGM PEIRMGNIFS PPVEITFEPW VKAWSQACTG LNCDGLSRGF WNSVRITVPS
MLISILIASV SGYSLANWRF KGANLFFAVL VVGAFIPYQV MIYPIVIILR EAGIYGSLSG
LVIVHTIFGM PILTLLFRNY FSSLPEELFK AARVDGAGFW QIYFRIMLPM SLPIFVVAMI
LQVTGIWNDF LFGVVFTRPE YYPMTVQLNN IVNSVQGVKE YNVNMAATIL TGAVPLIIYF
VSGRLFVRGI AAGAVKG
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