| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2400 |
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| Symbol | |
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| ID | 7386035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1969699 |
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| End bp | 1970601 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643651528 |
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| Product | ABC transporter membrane spanning protein (sugar) |
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| Protein accession | YP_002549717 |
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| Protein GI | 222148760 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.239524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGGCCA AGGGCCAAAC CACGCGACCC ACACGGTGGC TGCGCAATCT GAATGCAAAA
ATTGCATCGA TCCCGATGAT CCTGATCGCG ACAGTGATCT TCTTCGGTGG CAGTCTATGG
ACGGTCGTTT ATTCTTTTAC CAATTCCAAG CTTTTGCCGA GGCTGAATTT TGTTGGCCTT
GATCAGTATG ACCGCCTGTG GAGTTCGGCG CGCTGGATTA TTTCCATTCA AAATCTGGCA
ATCTACGGTG TGCTGTCGCT TCTCTTCAGT CTTGTCATCG GCTTTGTGCT GGCGGCGCTG
ATGGATCAGA AAATCCGCTT TGAAAACGTG TTTCGCACGA TATTTCTCTA TCCCTTTGCC
CTGTCCTTCA TTGTGACGGG TCTGGTGTGG CAGTGGATTC TCAATCCTGA ATTCGGCATT
CAATCGGTTA TCCGCTCGCT GGGGTTCACC AATTTTAATT TCGATCCGCT CTATAACCAG
TCCATCGTGA TCTACGGCAT TCTGATTGCC GGGTTGTGGC AGGGCACGGG TCTGGTGATG
TGCCTGATGC TGGCGGGCCT GCGCGGCATT GATGAGGATA TCTGGAAGGC ATCGCGCGTT
GATGGCATTC CGACCTGGAA AACCTATCTG CTGATCATCA TTCCCATGAT GCGCCCGGTG
TTCATCACCA CGGTGGTTAT CATCACCAGC GGCATTGTTA AGGTCTATGA TCTGGTGGTG
GCACAAACCA GCGGCGGACC CGGCATTGCC TCGGAAGTGC CTGCCAAATA TGTTTATGAC
TATATGTTTC AGGCGCAAAA TCTGGGGCAG GGCTTTGCTG CCTCCACCAT GATGCTGCTC
ACTGTCGCCA TTATTGTCAT CCCATGGGCC TATCTGGAAT TTGGAGGGCG CAAGCGTGGC
TGA
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| Protein sequence | MMAKGQTTRP TRWLRNLNAK IASIPMILIA TVIFFGGSLW TVVYSFTNSK LLPRLNFVGL
DQYDRLWSSA RWIISIQNLA IYGVLSLLFS LVIGFVLAAL MDQKIRFENV FRTIFLYPFA
LSFIVTGLVW QWILNPEFGI QSVIRSLGFT NFNFDPLYNQ SIVIYGILIA GLWQGTGLVM
CLMLAGLRGI DEDIWKASRV DGIPTWKTYL LIIIPMMRPV FITTVVIITS GIVKVYDLVV
AQTSGGPGIA SEVPAKYVYD YMFQAQNLGQ GFAASTMMLL TVAIIVIPWA YLEFGGRKRG
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