Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2388 |
Symbol | |
ID | 7386026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1956980 |
End bp | 1959439 |
Gene Length | 2460 bp |
Protein Length | 819 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643651519 |
Product | heavy-metal transporting P-type ATPase |
Protein accession | YP_002549708 |
Protein GI | 222148751 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase [COG2608] Copper chaperone |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.168329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCCA GCAACACCCT TGAAACCACC ATCGCTATCG ATGGCATGAA TTGCGCTTCT TGCGTGCGGC GGGTCGAAAA GGCGATTGTC GCCGTGCCGG GCGTATCGTC TGCCTCGGTC AATCTGGCCA GTGAAAAGGC AAGTGTGCAA TTTTCCCAGC AGCCGGATCT CGCCGCCGTG CTGGCAGCCA TTCAACAGGC CGGTTATGCG CCGCGTATCG AGACCCAGGA ATTGGACATA GACGGCATGA ACTGCGCCTC CTGTGTGCGG CGCGTGGAAA AAGCCTTGGC CGCCGTGCCA GGCGTCAGTT TAGCTGCGGT CAATCTGGCA ACCGAACGCG CTACCGTGAC TGTCACCGCA GACACGGATA GACAGACCCT CGTGGCTGCC GTTGAACAGG CCGGTTATCA CATTCGCAAA CCCGCCAATC CGGAAGCGCC GTCCGACCCC CTGCCCGATC AGCGCGCTGA TGAGACGCAT CGCTTGACGC GGATGACTGT GATTGCCTTT CTCCTGACTC TTCCGGTTTT CATCATCGAA ATGGGGTCGC ACCTCATTCC TGCCCTGCAT GTCTGGGTGA TGAACACGCT TGGCATGCAG ACCAGCTGGG TGCTTCAGGC CCTGCTGGCC GGGCTAGTGC TGTTTGGTCC TGGCCTCACA TTCTTTCGCC GTGGCGTGCC GAACCTGATA GGCCTTCATC CAGATATGAA CTCGCTGGTG GTGCTGGGCG CATCCGCCGC CTATGGCTAT TCGCTGGTCG CCACGTTCAT GCCGGGGCTG ATGCCGCAAG GCACCGTCAA TGTCTATTAT GAGGCGGCAG CCGTTATCGT CACGCTGGTG CTGCTGGGCC GAACGCTGGA AAGTCGTGCC AAAGGCCGGA CCAGCGACGC CATTAAACGG CTGATCGGCC TTAGCCCCAA AACCGCGCGG GTGATCCGGG AGGGCAAGCC TGTTGATCTC GACATTGCCG CCGTTATCGT CGGTGACATC TTGGACATCC GTCCCGGCGA AAGACTTCCT GTCGATGGCG TGGTGATCGA AGGCCGCTCC TTTATCGACG AATCGATGAT CTCAGGCGAG CCGGTTCCGG TGGAAAAGGC AGACGGCGAC GTAGTAACCG GCGGTACAAT TAACAAAAAC GGCGCCTTCC GGTTTCGCGC CACCAAGGTC GGGGCTGACA CGCTGCTCTC CCAGATCATC CGCATGGTGG AAACCGCGCA AGGCTCGAAA CTCCCGATTC AAGGGATGGT GGACCGGATA ACCGGCTGGT TCGTTCCAGC CGTGATCGCG GCGGCTCTGC TCACCTTCAT TGTCTGGCTG TTGTTTGGCC CCACGCCTGC ACTCAGCTAT GCGCTGGTCA ATGCGGTTGC TGTGCTGATC ATCGCCTGCC CCTGCGCCAT GGGGCTGGCC ACACCGACCT CGATCATGGT TGGCACCGGC CGTGCCGCCG AGTTGGGCGT GCTGTTTCGC AAGGGCGAAG CCTTGCAAAG CCTGCGTGAT GTCACGGTCG TGGCTCTCGA CAAGACCGGC ACGCTAACCG AAGGCAGGCC GGAACTGACC GATCTGATGG CGGCAGACGG CTTTTCCCGC GCCGATATTC TGTCCTTCGC AGCCAGCCTA GAGGCGCGCT CAGAACACCC GATTGCCAAA GCCATCCTGG CCGCTTCCGA GGCTGAACAA GCGCCTCGCC AGATCGCAAC CGATGTTGTT GCAGAGCCAG GCTACGGTAT CAGCGGTATC GTCTCCGGCC ATCAGGTGCT TGTTGGTGCC GACCGGGCGC TGACCCGGCA TGGCATTGAT CTCTCGCCAT TTGCCGAGGA CGCCGAACAA CTCGGTTTGG ACGCAAAAAC CCCGCTCTAT CTGGCAATTG ATGGCAAACC CGTGGCTCTG ATGGCCGTCG CCGACCCGAT CAAGGCAACC ACACCGGCGG CAATCCGCGC CTTGCATGAC CTTGGCCTCA AGGTGGCGAT GATCAGCGGT GATAACCGCC GCACTGCGGA GGCTATCGCC GCCCGCCTCG GCATCGACAC GGTGATTGCC GAAGTCCTGC CCGACGGTAA GGTTGCGGCA ATTGCCGGTC TTCGCAAGGA TGGAAGCAAG CTTGCCTTCG TTGGCGATGG CATCAACGAT GCCCCGGCCC TGTCCGCCGC TGATATCGGC ATCGCAGTTG GCACCGGCTC CGATATCGCC ATCGAAAGCG CCGATGTCGT GCTGATGTCC GGCGACCTGC AAGGCGTGGC GCGGGCGATC TCCATCAGCA AGGCGGTGAT CCGCAATATC GGCCAGAACC TGTTCTGGGC CTTTGCCTAC AATGTCCTGC TGATCCCGCT GGCGGCTGGT CTGCTCTACC CCGTCAATGG AACATTGCTA TCGCCGATCT TCGCCGCCGG TGCGATGGGA CTGTCCAGTG TCTTTGTGCT GACCAACGCG CTCAGGCTGC GCAAGTTACG CCCGGCGTGA
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Protein sequence | MNASNTLETT IAIDGMNCAS CVRRVEKAIV AVPGVSSASV NLASEKASVQ FSQQPDLAAV LAAIQQAGYA PRIETQELDI DGMNCASCVR RVEKALAAVP GVSLAAVNLA TERATVTVTA DTDRQTLVAA VEQAGYHIRK PANPEAPSDP LPDQRADETH RLTRMTVIAF LLTLPVFIIE MGSHLIPALH VWVMNTLGMQ TSWVLQALLA GLVLFGPGLT FFRRGVPNLI GLHPDMNSLV VLGASAAYGY SLVATFMPGL MPQGTVNVYY EAAAVIVTLV LLGRTLESRA KGRTSDAIKR LIGLSPKTAR VIREGKPVDL DIAAVIVGDI LDIRPGERLP VDGVVIEGRS FIDESMISGE PVPVEKADGD VVTGGTINKN GAFRFRATKV GADTLLSQII RMVETAQGSK LPIQGMVDRI TGWFVPAVIA AALLTFIVWL LFGPTPALSY ALVNAVAVLI IACPCAMGLA TPTSIMVGTG RAAELGVLFR KGEALQSLRD VTVVALDKTG TLTEGRPELT DLMAADGFSR ADILSFAASL EARSEHPIAK AILAASEAEQ APRQIATDVV AEPGYGISGI VSGHQVLVGA DRALTRHGID LSPFAEDAEQ LGLDAKTPLY LAIDGKPVAL MAVADPIKAT TPAAIRALHD LGLKVAMISG DNRRTAEAIA ARLGIDTVIA EVLPDGKVAA IAGLRKDGSK LAFVGDGIND APALSAADIG IAVGTGSDIA IESADVVLMS GDLQGVARAI SISKAVIRNI GQNLFWAFAY NVLLIPLAAG LLYPVNGTLL SPIFAAGAMG LSSVFVLTNA LRLRKLRPA
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