| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2386 |
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| Symbol | gyrA |
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| ID | 7386025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1954063 |
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| End bp | 1956855 |
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| Gene Length | 2793 bp |
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| Protein Length | 930 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651518 |
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| Product | DNA gyrase subunit A |
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| Protein accession | YP_002549707 |
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| Protein GI | 222148750 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.380796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACTGAGC AAAGCACACC CGGCGGCAAA ATGCCGTCCG ATATCGAACC CATTTCGATT
ATAACGGAGA TGCAGCGGTC GTATCTCGAT TACGCGATGA GCGTTATCGT CAGCCGCGCA
CTTCCCGATG TCCGCGATGG TTTGAAGCCC GTTCATCGTC GCATTCTGTT TGGCATGTCC
GAGCTGGGTA TCGACTGGAA CAAAAAATAT GTGAAATGCG CCCGTGTAAC CGGCGACGTG
ATGGGTAAAT TCCATCCACA CGGCAACTCG GCGATCTATG ATGCGCTGGC CCGTATGGCG
CAGGATTGGT CGCTAAGGCT GCCGTTGATC GACGGTCAGG GCAATTTCGG CTCCATCGAC
GGCGATCCGC CAGCGGCGGA ACGCTATACC GAATGCCGCC TGCAAAAAGC CGCACATTCG
CTCCTGGACG ATCTCGACAA GGACACCGTC GATTTTCGTG ACAACTATGA TGGCACGCTG
TCTGAGCCTG TCGTCGTGCC AGCGAAATTC CCCAATCTGC TCGTCAATGG CGCTGGCGGT
ATCGCGGTCG GCATGGCGAC GAATATTCCG CCGCACAATC TGGTCGAAGT CATCAATGGC
TGTATCGCGC TGATTGAGAA CCCGGCTATC GACTTGCCGG AACTGATGCA GATCATTCCC
GGTCCCGATT TTCCGACTGG GGCGCTGATT CTGGGTCGAA GCGGCATTCG CTCTGCCTAT
GAGACCGGAC GTGGTTCGGT GATCATGCGC GGTGTGGCGC GGATCGAACC GATGCGCGGT
GATCGCGAAC AGATCATCAT CACCGAGATT CCCTATCAGG TGAACAAGTC GACGATGATC
GAGAAAATGG CCGAACTGGT GCGCGACAAG CGCATCGAGG GCATTTCCGA CCTGCGTGAC
GAATCCGACC GTCAGGGCTA CCGCGTCGTT GTCGAGTTGA AGCGCGATGC CAATGCGGAC
GTGATCCTCA ATCAGCTCTA CCGTTATACG CCGCTGCAAA GCTCGTTCGG CTGCAACATG
GTGGCGCTGA ATGGCGGCAA GCCGGAACAG TTGACGCTGC TCGACATGCT GCGGGCTTTC
GTCAGCTTCC GCGAGGAGGT TATTAGCCGG CGAACAAAGT ACCTGCTGCG CAAGGCGCGT
GACCGCGCCC ATGTGCTGGT TGGCCTCGCC ATTGCCGTTG CCAATATCGA TGAAGTCATC
CGGCTGATCC GCCAGGCGCC AGATCCACAA ACAGCGCGCG AGCAGTTGAT GGAGCGGCGC
TGGCCGGCAG CTGATGTCGA AAGTCTGATC CGGCTGATCG ATGATCCGCG CCATCGGATC
AACGAGGACA ACACCTATAA CCTGTCGGAA GAGCAGGCCC GCGCTATCCT TGAATTGCGT
CTTGCTCGCC TGACGGCCCT TGGTCGCGAT GAAATCGACG AGGAATTGAA CAAGATCGGG
GCGGAAATCT CCGATTATCT CGATATTCTG TCGTCTCGCA CGCGGATTCA AACCATCGTT
GTCGATGAGC TTGTCGCCGT GCGCGATGAA TTTGGCACGC CACGCCGCAG CCAGATCATG
GAGGGCGGTC CTGATATGGA CGATGAGGAT CTCATCGCCC GTGAAGACAT GGTGGTGACC
GTTTCGCATC TCGGCTATAT CAAGCGTGTT CCGCTGGTCA CCTATCGCGC CCAGCGTCGC
GGCGGCAAGG GTCGCTCCGG TATGGCAACC CGCGATGAGG ATTTCGTTAC CCGGCTATTT
GTTGCCAATA CCCATACGCC GGTTCTGTTC TTCTCGTCAC GCGGAATCGT CTACAAGGAG
AAGGTCTGGC GTCTGCCGAT CGGCACCCCA CAGTCGCGTG GCAAGGCACT GATTAACATG
CTGCCACTGG AGCCAGGCGA GCGGATCACA ACGATCATGC CGCTGCCCGA GGATGAGGCA
AGCTGGGATA ATCTCGACGT GATGTTCTCG ACGACGCGGG GCACCGTGCG TCGTAACAAG
TTGAGTGATT TTGTTCAGGT CAACCGCAAT GGCAAAATTG CGATGAAGCT TGAGGAAGAG
GGCGATGAAA TCCTCTCCGT CGAAACCTGC ACGATTGATG ACGATGTGCT TCTGACAACC
GCTTTGGGCC AGGCGATCCG CTTCCCTGTC GATGAAGTCA GAGTGTTTGC CGGTCGCAAT
TCCATCGGCG TTCGCGGCAT TTCGTTGCAG CCGAATGACC GGATCATCTC GATGACAATT
CTCAGCCATG TCGATGCCGA ACCATGGCAG CGTGCGGCCT ATCTGAAGCG TTCGGCTACC
GAGCGCCGCG CCAGTGGCGT GGATGAGGAC GACATCGCAC TGGTTGGCGA AGAGGTGGGT
GAAATCGGTG ATCTTTCCGA GGAACGTTAT CAGGAACTGA AGGCACGCGA ACAATTCGTG
CTGACGATTT CCGAACGCGG TATTGGCAAG CGCTCATCTT CTTACGATTT CCGTACGTCG
GGTCGAGGCG GCAAGGGCAT TCGGGCCACC GACACGTCGA AGACATTGGA AATCGGCCAG
TTGGTCGCCG CCTTCCCGGT CGAAGACAAG GACCAGATCA TGCTGGTCTC AGACGGTGGT
CAGTTGATCC GCGTGCCGGT TGATGGCATC CGCATCGCCA GCCGCGCCAC CAAGGGCGTG
ACGATCTTCA ATACTGCCAA GGATGAAAAG GTCGTATCGG TCGAGCGCAT CAACGAGCCG
GAAGGCGAAG AGGATGGCGA GATCGGCGCA GAGACCAGTG CCGAGGAGGG TGTCGCCACC
GATACAGCGA CGCCGGATGA GAGCGCGACC TAA
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| Protein sequence | MTEQSTPGGK MPSDIEPISI ITEMQRSYLD YAMSVIVSRA LPDVRDGLKP VHRRILFGMS
ELGIDWNKKY VKCARVTGDV MGKFHPHGNS AIYDALARMA QDWSLRLPLI DGQGNFGSID
GDPPAAERYT ECRLQKAAHS LLDDLDKDTV DFRDNYDGTL SEPVVVPAKF PNLLVNGAGG
IAVGMATNIP PHNLVEVING CIALIENPAI DLPELMQIIP GPDFPTGALI LGRSGIRSAY
ETGRGSVIMR GVARIEPMRG DREQIIITEI PYQVNKSTMI EKMAELVRDK RIEGISDLRD
ESDRQGYRVV VELKRDANAD VILNQLYRYT PLQSSFGCNM VALNGGKPEQ LTLLDMLRAF
VSFREEVISR RTKYLLRKAR DRAHVLVGLA IAVANIDEVI RLIRQAPDPQ TAREQLMERR
WPAADVESLI RLIDDPRHRI NEDNTYNLSE EQARAILELR LARLTALGRD EIDEELNKIG
AEISDYLDIL SSRTRIQTIV VDELVAVRDE FGTPRRSQIM EGGPDMDDED LIAREDMVVT
VSHLGYIKRV PLVTYRAQRR GGKGRSGMAT RDEDFVTRLF VANTHTPVLF FSSRGIVYKE
KVWRLPIGTP QSRGKALINM LPLEPGERIT TIMPLPEDEA SWDNLDVMFS TTRGTVRRNK
LSDFVQVNRN GKIAMKLEEE GDEILSVETC TIDDDVLLTT ALGQAIRFPV DEVRVFAGRN
SIGVRGISLQ PNDRIISMTI LSHVDAEPWQ RAAYLKRSAT ERRASGVDED DIALVGEEVG
EIGDLSEERY QELKAREQFV LTISERGIGK RSSSYDFRTS GRGGKGIRAT DTSKTLEIGQ
LVAAFPVEDK DQIMLVSDGG QLIRVPVDGI RIASRATKGV TIFNTAKDEK VVSVERINEP
EGEEDGEIGA ETSAEEGVAT DTATPDESAT
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