Gene Avi_2382 details

Gene Information

• Locus tag: Avi_2382
• Symbol: ssb
• ID: 7386023
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 1952252
• End bp: 1952782
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643651516
• Product: single-stranded DNA-binding protein
• Protein accession: YP_002549705
• Protein GI: 222148748
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.226437
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGGAA GCGTCAACAA GGTTATATTG ATCGGCAATC TGGGAGCTGA CCCGGAAATT 
CGCCGTACCC AGGACGGTAA GCCGATTGCC AACCTGCGCA TCGCCACGTC CGAATCCTGG 
CGCGACCGTA ATTCCGGCGA GCGCAAAGAA AAGACTGAAT GGCATAGCGT GGTGATCTTC 
AACGAAGGTC TCTGCAAGGT GGCCGAACAA TATCTGAAGA AGGGCGCAAC TGTTTATATC 
GAGGGCCAGC TTCAGACCCG TAAATGGCAG GACCAGAACG GCAATGACCG TTACTCGACG 
GAAATCGTCC TCCAGGGCTT CAATTCGACC CTGACCATGC TTGGCGGTCG TGGCGATGGG 
GCAGGCGGCG GTGCTGCCCG TGGCGGCAGC GATTTCGGCG GAGGGGGCGG TGGCTACGAC 
GACTACGGCT CGGCCCCGGC CCGCAGCGGC GGTGCGTCGT CCGGCGGTCG CGGTGCCAGT 
GCGCCGTCGG GCGGATTCTC GCGCGATATG GATGACGATA TTCCGTTCTG A 

 

Protein sequence

MAGSVNKVIL IGNLGADPEI RRTQDGKPIA NLRIATSESW RDRNSGERKE KTEWHSVVIF 
NEGLCKVAEQ YLKKGATVYI EGQLQTRKWQ DQNGNDRYST EIVLQGFNST LTMLGGRGDG 
AGGGAARGGS DFGGGGGGYD DYGSAPARSG GASSGGRGAS APSGGFSRDM DDDIPF