| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2378 |
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| Symbol | |
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| ID | 7386019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1946201 |
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| End bp | 1947682 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651512 |
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| Product | hypothetical protein |
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| Protein accession | YP_002549701 |
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| Protein GI | 222148744 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.946699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCAAA CATCTTTTCA TCACCTGATT TCTCCCTCTT CCATGGCGCT GGTGGACCTT
GATGCGGCCA ACTCGGGCAT CGATAGTTAT GGCCTGATGC GCAAGGCCGG TTCTGCCGTG
GCGGCAGCGG CACTCCGGCT TTTCCCCCAG GCGCTGAGGG TGGCGGTGCT GTGTGGGCCG
GGAAACAATG GCGGTGACGG CTATGTTGCG GCTGAAGCGC TGCGTCAATC CGGGGTTTTG
GTGCAGGTCT TTTACCTGGG CGAGCCGGAA AAGTTGAATG GAGATGCCGC TCTGGCTTTT
GCCGACTACC AGGGCAAGGC CGAACCCCTA GCTCTCTATG ATCCTCAGCA GGGGGATCTG
GTGGTAGACG CTTTGTTCGG AGCAGGCCTC GCGCGGTACT TGCCTTTGCC GGTGACAGAA
CTGATCGAGC GGGTCAATCG GGTCGGTATC GCCGTTGTCG CGGTCGATCT GCCCTCCGGT
ATAGACGGCC GCACGGGCCA GCCCCGCCCG GTGGCGTTTC AGGCAGCCCA TACGGTGACA
TTCATGGCAA GAAAGCCGGG ACATGTGCTG CTACCTGGAC GTTCGCTCTG CGGCACGGTG
GAGATCTACG ATATCGGCAT CCCTTGTCGC ACCATTGAAC AACATCGAGG AGACGTTGCT
GTCAATCATC CCGATTTATG GGCGCATCTC CTGCCAAGGA TCTCCGGCGC TAGCCATAAA
TTCACCCGCG GCCATCTTAC GGTGTTTTCC GGGCGCAGCA GCGCGACAGG TGCCGCGCGG
CTGTCCGCTA TGGCAGGATT GAAGGCCGGG GCCGGGCTGG TGACACTGGC CTCACCGGCC
AGTGCCGTTC TTGTCAATGC CGCGCAGACC ACTGCCGTGA TGGTGAAGGC CATCAATGAT
CTTGATGACC TTGAGGACTA TCTGACTGAC CAGCGGATGA GCGCCTTCGT GCTCGGACCC
GGATTTGGGA TTGGCGAAAA GGCGCGGGAA TTCACCCTTT CGCTGTCCAA ACGCAGGCTG
ATTCTCGATG CCGACGGTAT TTCTTCTTTT AGGGATCAAC CAGACGAGCT TTTCGACGCA
TTTTCCGGCA ATGAAACCCG CTTGGTTCTG ACGCCGCATG AGGGCGAGTT TGCTCGCCTG
TTTGCCGATA TTGCCGGTGA GAAGACGTTG GGCAAAGTTG AAAAGGCCCA GGCTGCCGCC
AGAAAAGCCA ATGCGGCGGT GGTCTACAAA GGTGCAGACA CAGTGATTGC CGCTCCCGAT
GGCCGGGCGC TGATCAACGA AAATGCGCCG CCGTGGCTTG CCACAGCCGG TTCCGGCGAT
GTGTTGGCCG GGATCATCGG CGGACTACTA GCGCAAGGCG TTCCGGCCTT TGAGGCTGCG
GCAGCAGGTG TCTGGCTGCA TGCTGAAACG GGCGCAAGGC TCGGCGAGGG ATTGACAGCA
GAGGATCTGG CTGCGGCTGT GAAACCCTTT CGCCAAGGCT AA
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| Protein sequence | MMQTSFHHLI SPSSMALVDL DAANSGIDSY GLMRKAGSAV AAAALRLFPQ ALRVAVLCGP
GNNGGDGYVA AEALRQSGVL VQVFYLGEPE KLNGDAALAF ADYQGKAEPL ALYDPQQGDL
VVDALFGAGL ARYLPLPVTE LIERVNRVGI AVVAVDLPSG IDGRTGQPRP VAFQAAHTVT
FMARKPGHVL LPGRSLCGTV EIYDIGIPCR TIEQHRGDVA VNHPDLWAHL LPRISGASHK
FTRGHLTVFS GRSSATGAAR LSAMAGLKAG AGLVTLASPA SAVLVNAAQT TAVMVKAIND
LDDLEDYLTD QRMSAFVLGP GFGIGEKARE FTLSLSKRRL ILDADGISSF RDQPDELFDA
FSGNETRLVL TPHEGEFARL FADIAGEKTL GKVEKAQAAA RKANAAVVYK GADTVIAAPD
GRALINENAP PWLATAGSGD VLAGIIGGLL AQGVPAFEAA AAGVWLHAET GARLGEGLTA
EDLAAAVKPF RQG
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