Gene Avi_2372 details

Gene Information

• Locus tag: Avi_2372
• ID: 7386015
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 1942819
• End bp: 1943454
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643651508
• Product: hypothetical protein
• Protein accession: YP_002549697
• Protein GI: 222148740
• COG category: [R] General function prediction only
• COG ID: [COG5342] Invasion protein B, involved in pathogenesis

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.889914
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGTTTA CAGCAGCCAA AACCGCGCGT GCGGCACTCT CCGCTCTCGT TCTCTCCACT 
GGCTTTGCTG GCGCATCTTT TGCCCAGCAG CAGCCCGCTG GCGATGCCGG CTTGCCGCCG 
CAGGGTTGGT TCAAGACCTG CGCCAAGCAG GAAGACAACG ATATCTGCAC GGTGCAGAAC 
ATTCAGGTCG CGCAGAACCG CCAGATGATT ATCGCCGTGG CGATCATCTC CATCGAAGGC 
AAGATGAACC GCAAGCTGAT GCAGGTTTCC GTGCCTTCCG CACGGCTCGT CCCTCCGGGC 
GTCGTTTTGC AGATCGATGG CGGCAAGGGC CAGAAGATCG ATTACGCCGT CTGCTTCCCG 
GACCGTTGCA CAGCTGAAAT TCCGCTGACG GACGCGATGA TTGCCAGCCT GAAGAAGGGG 
CATGACGTGG TGTTCACGTC GATGAACTTC CGCCGCGTTC CAAACCCGAT CAAGATTTCG 
CTTGATGGCT TTACCGGCTC TTACGATGGC CCAGCTATCA CCCAGTCCCA GGCGCAGGAG 
CGCCAGCGTC TGCTGGAAGA AGCCATGCAG AAGAAGAACG AAGAATCGCA GAAGGCCCTG 
GAAGACGCCC AGAAGGCCGC CAAGGAAACC AAATAA 

 

Protein sequence

MTFTAAKTAR AALSALVLST GFAGASFAQQ QPAGDAGLPP QGWFKTCAKQ EDNDICTVQN 
IQVAQNRQMI IAVAIISIEG KMNRKLMQVS VPSARLVPPG VVLQIDGGKG QKIDYAVCFP 
DRCTAEIPLT DAMIASLKKG HDVVFTSMNF RRVPNPIKIS LDGFTGSYDG PAITQSQAQE 
RQRLLEEAMQ KKNEESQKAL EDAQKAAKET K