Gene Avi_2309 details

Gene Information

• Locus tag: Avi_2309
• ID: 7386386
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 1895629
• End bp: 1896231
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643651468
• Product: hypothetical protein
• Protein accession: YP_002549657
• Protein GI: 222148700

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.732816
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGATG TGATGTGGTC AATCACCGAA ATTGCGGCGC GGGACAGTGT TTCGAAGGCG 
GCGATTTCCA AGGCGGTCAA GAGGTTGCTG GAAGCCCACC CGGATACGCC TGTTGATCGT 
GGTCCGCAGG GGCAAGTCAT GCGGGTGTCT CTGGCGCACT ATGACCATTA CCGGGCGCGC 
TATATCAACC CTGCCAAGGC CACCGCGCCT GTTCGGCCTA TTGGGTCAGA TGAGGCGGCG 
GCAGGCGCAG GGCCGCAGGT GCCGCAGGGT GATAGACTGG AGGAGGCTCG CCGACAGAGA 
GAATGGTTGG CTCTTGGCCG TGAGCGATTG CGGGACCAGG AAGAACGCGG ACAACTTGTT 
CGAAAGGACA AAGTGGATGC TGCGGTTCTT GCCATTGGCG CGGAATTACA GGCGATTCTT 
CGGCGGCTGC CAAACCGGGC GGACGATATT GCCCTGGCTG TCTCGAAAGA GGGCGTGCAT 
AGCGTGCGGG TCCTGTTGCG GGAAATCGCT TTCGAGATCG GCAACGAGAT GGCGGACAAG 
CTGGAGGCGA TTGCCAGCGA AGCGCCGACC GGTGATGCTT TGATCGAGGA AGAGGAAGCG 
TGA 

 

Protein sequence

MSDVMWSITE IAARDSVSKA AISKAVKRLL EAHPDTPVDR GPQGQVMRVS LAHYDHYRAR 
YINPAKATAP VRPIGSDEAA AGAGPQVPQG DRLEEARRQR EWLALGRERL RDQEERGQLV 
RKDKVDAAVL AIGAELQAIL RRLPNRADDI ALAVSKEGVH SVRVLLREIA FEIGNEMADK 
LEAIASEAPT GDALIEEEEA