Gene Avi_2303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2303 
Symbol 
ID7386383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1891841 
End bp1892251 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content55% 
IMG OID643651465 
ProductProphage antirepressor 
Protein accessionYP_002549654 
Protein GI222148697 
COG category[K] Transcription 
COG ID[COG3617] Prophage antirepressor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.634607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGGCCTT TGCCGAGCTG GGCACGCAGT TGTCAGGCAA CAAACCGCCT ACCTGACGAT 
GAAAAGGCGT ATTGGAATCT GAATACCGTC ACTTCTAATG ACGGTATTCG TGCAGGGAGC
CCACATGCTA CCATCGGCAA CGAGCCCGGT CTCTACCGCC TGATCTTCTC CAGCACCAAG
CCGGAGGCCG AACGCCTAAA GCGCTCTGTC TTTAATAAGG TCTTTCAACC CTGCGCTGCC
AGCCGTTTTG CTCCAGCCGC GGTGATCGAT CAGGAAATTG TCCGAGAGCA ACTCGCCATG
GTGCGCGCAG GCGCGGTCTA CCAGCGATAT CAACAATGGT CTGCTGCAAA CAACACACCT
TACATCATGA AATCTTCGCT CGGCAAACTC TTGATCGGGC GGGGCTGGTG A
 
Protein sequence
MRPLPSWARS CQATNRLPDD EKAYWNLNTV TSNDGIRAGS PHATIGNEPG LYRLIFSSTK 
PEAERLKRSV FNKVFQPCAA SRFAPAAVID QEIVREQLAM VRAGAVYQRY QQWSAANNTP
YIMKSSLGKL LIGRGW