Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2303 |
Symbol | |
ID | 7386383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1891841 |
End bp | 1892251 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643651465 |
Product | Prophage antirepressor |
Protein accession | YP_002549654 |
Protein GI | 222148697 |
COG category | [K] Transcription |
COG ID | [COG3617] Prophage antirepressor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.634607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGGCCTT TGCCGAGCTG GGCACGCAGT TGTCAGGCAA CAAACCGCCT ACCTGACGAT GAAAAGGCGT ATTGGAATCT GAATACCGTC ACTTCTAATG ACGGTATTCG TGCAGGGAGC CCACATGCTA CCATCGGCAA CGAGCCCGGT CTCTACCGCC TGATCTTCTC CAGCACCAAG CCGGAGGCCG AACGCCTAAA GCGCTCTGTC TTTAATAAGG TCTTTCAACC CTGCGCTGCC AGCCGTTTTG CTCCAGCCGC GGTGATCGAT CAGGAAATTG TCCGAGAGCA ACTCGCCATG GTGCGCGCAG GCGCGGTCTA CCAGCGATAT CAACAATGGT CTGCTGCAAA CAACACACCT TACATCATGA AATCTTCGCT CGGCAAACTC TTGATCGGGC GGGGCTGGTG A
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Protein sequence | MRPLPSWARS CQATNRLPDD EKAYWNLNTV TSNDGIRAGS PHATIGNEPG LYRLIFSSTK PEAERLKRSV FNKVFQPCAA SRFAPAAVID QEIVREQLAM VRAGAVYQRY QQWSAANNTP YIMKSSLGKL LIGRGW
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