| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2279 |
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| Symbol | hom |
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| ID | 7386368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1871598 |
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| End bp | 1872920 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651445 |
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| Product | homoserine dehydrogenase |
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| Protein accession | YP_002549639 |
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| Protein GI | 222148682 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.010802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATG CCCTTAAGAT CGGCATTGCG GGTCTCGGAA CCGTTGGTGC GTCACTGGCG
CGTATTTTGC AAACCCGCAC CCAAGCGCTT ACCGTCGCCT GCGGTCGGCC CATTGCCATT
TCTGCGGTCT CGGCGCGCGA CAAGACCCGC GATCGCGGCG TCGATCTTGC CGGTATCGCC
TGGTTCGACA GCCCGGTCGA GATGGCTGAA AAGGCCGATA TCGATGTGTT CGTCGAGCTG
ATCGGCGGTG CGGAAGGACC AGCCGAACAC TCCGTTCGCG CGGCCCTTGG TCGTGGCGTG
CATGTGGTGA CTGCAAACAA GGCGCTGCTG GCCCGCCATG GTGTGGAACT GGCCAAGCTG
GCGGAAGAAA AGGGCCTTTT GATCAATTAT GAAGCTGCTG TCGCGGGCGG CATTCCGGTT
ATCAAGACGC TGCGTGAATC GCTGACCGGC AATGATTTTT CGCGGATCTA CGGCATCATG
AACGGCACCT GCAATTACAT CCTGACCCGG ATGGAAAAGG AGGGCTTGAG CTTTGCCGAT
TGCCTGGCGG AAGCCCAGCG CTTAGGCTAT GCCGAGGCCG ATCCGACCTT CGATATCGAG
GGCAATGATA CGGCCCATAA GCTGTCGATC CTGACAACGC TGGCCTTCGG CAGCCAAATT
GCTGCCGACG AGATCTATCT CGAAGGCATC AGCAATATTT CCATCGATGA TATCCACGCC
GCGCGCGATC TCGGCTACCG AATCAAGCTG CTCGGCGTGG CGCAAAAGAC CGCCACCGGT
ATCGAACAGC GCGTCCATCC GACCATGGTG CCGCTCGACT CGGTGATTGC CCAGGTCGAT
GGCGTGACGA ATGCGGTTGC GCTGGAATCC GATATTCTCG GCGAATTGCT GATGGTCGGC
CCCGGCGCCG GTGGCAATGC CACGGCATCC GCCGTGCTGG GTGACATTAC CGATATCGCC
AAAAGCCGTC CCGGCGCGCA GATGGTTCCG GTTCTGGGCC GCCCGGCGCA TCTGCTCGAG
CCCTATGTCC AGGCCGAGAT GACCCGGCAT GAAGGCGGCT ACTTTATCCG CCTGACCGTG
GTCGATCGCA CCGGCGTTTT CGCTAGCATT GCGACGCAGA TGGCGGAAAA TAACATTTCA
CTCGAATCGA TTGTCCAGCA CTCGCAGACA TCGTCTGACG CCGATCAGAC CAAGACGATT
ATCCTCGTTA CCCATGCCAC ACTGGAAAAA TCCGTGCGCC AGGCCGTTGC CGCCATCAAG
GAGGAAGGCT ATTTGCTGGG CGAACCGCAA GTGATCCGCA TCGAGCGGCC GAAAACAGCT
TAG
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| Protein sequence | MADALKIGIA GLGTVGASLA RILQTRTQAL TVACGRPIAI SAVSARDKTR DRGVDLAGIA
WFDSPVEMAE KADIDVFVEL IGGAEGPAEH SVRAALGRGV HVVTANKALL ARHGVELAKL
AEEKGLLINY EAAVAGGIPV IKTLRESLTG NDFSRIYGIM NGTCNYILTR MEKEGLSFAD
CLAEAQRLGY AEADPTFDIE GNDTAHKLSI LTTLAFGSQI AADEIYLEGI SNISIDDIHA
ARDLGYRIKL LGVAQKTATG IEQRVHPTMV PLDSVIAQVD GVTNAVALES DILGELLMVG
PGAGGNATAS AVLGDITDIA KSRPGAQMVP VLGRPAHLLE PYVQAEMTRH EGGYFIRLTV
VDRTGVFASI ATQMAENNIS LESIVQHSQT SSDADQTKTI ILVTHATLEK SVRQAVAAIK
EEGYLLGEPQ VIRIERPKTA
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