| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2278 |
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| Symbol | |
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| ID | 7386367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1870311 |
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| End bp | 1871528 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651444 |
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| Product | aminotransferase |
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| Protein accession | YP_002549638 |
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| Protein GI | 222148681 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0874685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGAGT TTCACAAAGT TCGGCGTCTG CCGCCCTATG TTTTCGAACA GGTCAACCGT
TTGAAGGCAA GCGCGCGAGC CGGTGGCGCT GATATCATCG ATCTCGGCAT GGGCAATCCC
GATCTTCCGA CCCCGCAGAA CATTGTCGAC AAGCTGTGTG AGGCCGTTCA GGACCCGCGC
ACCCATCGCT ATTCCTCGTC CAAGGGCATT CCGGGGCTGC GCCGGGCGCA GGCCGCCTAT
TATGCCCGCC GTTTCAATGT GAAGCTCAAC CCCGAAACTC AGGTTGTCGC GACGCTGGGA
TCGAAGGAAG GCTTTGCCAA TATGGCGCAG GCGATCACTG CGCCAGGCGA CGTGATCCTT
TGCCCCGATC CGACTTACCC GATTCATGCC TTTGGCTTCC TGATGACCGG CGGTGTGATT
CGCTCCATCC CGGTCGAGCC GGATGAAACC TTTTTCCCGC CGCTGGAGCG TGCGGTGCGC
CACTCTATTC CGAAGCCTCT GGCGCTGATT ATCAATTATC CGTCCAATCC GACGGCGCGC
GTCGCCTCGC TGGATTTCTA CAAGGACGTG ATCGCCTTTG CCAAAAAGCA TGAATTGATC
GTGCTGTCGG ATCTCGCCTA TTCGGAGATC TATTTCGATG GCAACCCGCC GCCATCGGTG
TTGGAAGTGC CTGGAGCCAT GGATGTCGCG GTGGAATTCA CCTCGATGTC GAAAACCTTC
TCCATGCCCG GTTGGCGCAT GGGCTTTGCC GTGGGCAATG AACGGCTGAT CAGTGCCCTG
GCCCGTGTGA AATCCTACCT GGATTACGGT GCGTTCACGC CGATCCAGGT GGCCGCTACC
CATGCGCTGA ATGGCGATGG CACGGATGTT GCTGAAGTGC GCAATATCTA CAAGCGCCGC
CGTGACGTGC TGGTCGAAAG CTTCGGCAAG GCCGGTTTCG AGGTGCCGCC ACCGGCGGCA
ACGATGTTTG CCTGGGCAAA AATTCCCGAA AAATTCCGCC ATCTCGGTTC GCTGGAATTT
TCCAAGCTGC TGGTGGAAAA GGCCGATATG GCTGTTGCGC CGGGCATTGG CTTTGGTGAG
CAGGGTGATG ATTACGTCCG CATCGCGCTG GTCGAAAACG AGCACCGCAT CCGCCAGGCC
GCCCGCAATC TGAAGCGGTT CCTGTCGACA GCGGACGACA CCCTGCACAA TGTCGTATCG
CTCAACGCTC ACCGTTGA
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| Protein sequence | MEEFHKVRRL PPYVFEQVNR LKASARAGGA DIIDLGMGNP DLPTPQNIVD KLCEAVQDPR
THRYSSSKGI PGLRRAQAAY YARRFNVKLN PETQVVATLG SKEGFANMAQ AITAPGDVIL
CPDPTYPIHA FGFLMTGGVI RSIPVEPDET FFPPLERAVR HSIPKPLALI INYPSNPTAR
VASLDFYKDV IAFAKKHELI VLSDLAYSEI YFDGNPPPSV LEVPGAMDVA VEFTSMSKTF
SMPGWRMGFA VGNERLISAL ARVKSYLDYG AFTPIQVAAT HALNGDGTDV AEVRNIYKRR
RDVLVESFGK AGFEVPPPAA TMFAWAKIPE KFRHLGSLEF SKLLVEKADM AVAPGIGFGE
QGDDYVRIAL VENEHRIRQA ARNLKRFLST ADDTLHNVVS LNAHR
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