Gene Avi_2271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2271 
Symbolmap 
ID7386361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1863690 
End bp1864526 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content60% 
IMG OID643651438 
Productmethionine aminopeptidase 
Protein accessionYP_002549632 
Protein GI222148675 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.910339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAATT ACATCGACGC GGCAACCGCG CCGCTTAAAA ACACCGGTGC GATCCGTCTC 
TATGGCGCGG ATGCGTTCGA AGCGATGCGC AAGGCCTGCC AGGTCACAGC CCGCTGCCTG
GACGCCTTGG CCCCGATGGT AAAGCCCGGC GTTACCACCA ATGAAATCGA CAGGTTTGTC
TTCGATTTTG GCATGGACAA CGGCGTTCTG CCTGCAACCC TGAATTATCG CGGCTACCGG
CACTCGGTCT GCACCTCGAT CAACCATGTT GTCTGCCACG GTATTCCCGA TGAAAAACCG
TTGCGCGAAG GCGATATCGT CAATATCGAC GTGACCTATG TGGTGGATGG CTGGCATGGC
GATTCCAGCC GGATGTATCC GGTCGGCGAA ATCAAGCGCG CCGCCGAACG TCTGCTCGAA
GTCACCCATG AATGCCTGAT GCGTGGCATA GAGGCCGTCA GGCCGGGAGC GCGCACGGGC
GCGATCGGTG CAGCCATCCA AAGCTTTGCC GAGGCGCAGC GCTGTTCCGT GGTGCGTGAT
TTCTGCGGCC ACGGCGTTGG CCAACTGTTT CACGACAGCC CAAATATCCT GCATTATGGC
CGGCCCGACG AAGGCCCGGA AATACGCGAG GGCATGATCT TCACCATCGA GCCGATGATC
AATCTGGGCA AGCCGCATGT GAAGGTATTG GCCGATGGCT GGACGGCGGT GACCCGCGAC
CGGTCGTTGA CAGCGCAGTA TGAACATACC GTCGGCGTTA CCTCGTCCGG CTGCGAAATC
TTCACACTGT CGCCTGCCGG GCTTGACCGT CCGGGCCTGC CTCCCTTGCA AGGCTGA
 
Protein sequence
MVNYIDAATA PLKNTGAIRL YGADAFEAMR KACQVTARCL DALAPMVKPG VTTNEIDRFV 
FDFGMDNGVL PATLNYRGYR HSVCTSINHV VCHGIPDEKP LREGDIVNID VTYVVDGWHG
DSSRMYPVGE IKRAAERLLE VTHECLMRGI EAVRPGARTG AIGAAIQSFA EAQRCSVVRD
FCGHGVGQLF HDSPNILHYG RPDEGPEIRE GMIFTIEPMI NLGKPHVKVL ADGWTAVTRD
RSLTAQYEHT VGVTSSGCEI FTLSPAGLDR PGLPPLQG