Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2271 |
Symbol | map |
ID | 7386361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1863690 |
End bp | 1864526 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643651438 |
Product | methionine aminopeptidase |
Protein accession | YP_002549632 |
Protein GI | 222148675 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0024] Methionine aminopeptidase |
TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.910339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAATT ACATCGACGC GGCAACCGCG CCGCTTAAAA ACACCGGTGC GATCCGTCTC TATGGCGCGG ATGCGTTCGA AGCGATGCGC AAGGCCTGCC AGGTCACAGC CCGCTGCCTG GACGCCTTGG CCCCGATGGT AAAGCCCGGC GTTACCACCA ATGAAATCGA CAGGTTTGTC TTCGATTTTG GCATGGACAA CGGCGTTCTG CCTGCAACCC TGAATTATCG CGGCTACCGG CACTCGGTCT GCACCTCGAT CAACCATGTT GTCTGCCACG GTATTCCCGA TGAAAAACCG TTGCGCGAAG GCGATATCGT CAATATCGAC GTGACCTATG TGGTGGATGG CTGGCATGGC GATTCCAGCC GGATGTATCC GGTCGGCGAA ATCAAGCGCG CCGCCGAACG TCTGCTCGAA GTCACCCATG AATGCCTGAT GCGTGGCATA GAGGCCGTCA GGCCGGGAGC GCGCACGGGC GCGATCGGTG CAGCCATCCA AAGCTTTGCC GAGGCGCAGC GCTGTTCCGT GGTGCGTGAT TTCTGCGGCC ACGGCGTTGG CCAACTGTTT CACGACAGCC CAAATATCCT GCATTATGGC CGGCCCGACG AAGGCCCGGA AATACGCGAG GGCATGATCT TCACCATCGA GCCGATGATC AATCTGGGCA AGCCGCATGT GAAGGTATTG GCCGATGGCT GGACGGCGGT GACCCGCGAC CGGTCGTTGA CAGCGCAGTA TGAACATACC GTCGGCGTTA CCTCGTCCGG CTGCGAAATC TTCACACTGT CGCCTGCCGG GCTTGACCGT CCGGGCCTGC CTCCCTTGCA AGGCTGA
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Protein sequence | MVNYIDAATA PLKNTGAIRL YGADAFEAMR KACQVTARCL DALAPMVKPG VTTNEIDRFV FDFGMDNGVL PATLNYRGYR HSVCTSINHV VCHGIPDEKP LREGDIVNID VTYVVDGWHG DSSRMYPVGE IKRAAERLLE VTHECLMRGI EAVRPGARTG AIGAAIQSFA EAQRCSVVRD FCGHGVGQLF HDSPNILHYG RPDEGPEIRE GMIFTIEPMI NLGKPHVKVL ADGWTAVTRD RSLTAQYEHT VGVTSSGCEI FTLSPAGLDR PGLPPLQG
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