| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2263 |
|---|
| Symbol | |
|---|
| ID | 7386355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 1858467 |
|---|
| End bp | 1859252 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643651432 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002549626 |
|---|
| Protein GI | 222148669 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5387] Chaperone required for the assembly of the mitochondrial F1-ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGATA TTTTCGAGGG CCTGACGCCT GAATTAAGCG ATCCTGATCC GGTACGCCGG
GCGCAGATCC AGATGAAAAA GCCCTTGCCG AAGCGCTTCT ATAAAGACGT GACCATTGCA
GCGGGGCAGG ATGGTCATGC GGTGCTTCTG GATGGCAAGA CGGTCAAGAC ACCAGCCCGA
AACGCCCTCG TGCTGCCGAC AGAGCCTTTG GCTGCGTTGG TTGCTGGCGA ATGGCAGGGA
CAAGGTGAGT TCATCGATCC CGCAACGATG CCGGTTACCC GGCTGGTGAA TACGGCGCTT
GATGCTGTCA GCGCCAATAC GCAAGAGGTA CTGGACGATA TTGTCCGGTT CTGCGGCAAT
GACATGCTCT GCTACCGGGC CGATGCGCCT CAGGAACTGG TGGAGCGCCA GAGTGCAAAA
TGGGACCCGG TTTTAGGCTG GCTTGCCGAT ACGCATGGCG CACGGGTTCT TCAGACCAGC
GGCATCATCT ACCAACCCCA GCCATCGGAC GCAATCGAGG CATTTGAGCG GGCATTGCAG
CGCTATCGCG ATGGTGTGGC GCTCGCCAGC CTGCACGTGA TGACGTCGCT GACAGGGTCC
GCCATTCTGG CGCTGGCGCT GGCCGATGGC GCGCTGACAT TGTTCGACGC CTGGGATCTC
GCCCATCTGG ACGAAAACTG GACGGACGAG CACTGGGGCA GCGATATGGA AGCAGAAGCA
CGACGCGCGG CCCGTTTCGT AGACATGCAG TCCGCCTATG ATGTGCTGAG GGCTGCTCGC
GCTTGA
|
|---|
| Protein sequence | MRDIFEGLTP ELSDPDPVRR AQIQMKKPLP KRFYKDVTIA AGQDGHAVLL DGKTVKTPAR
NALVLPTEPL AALVAGEWQG QGEFIDPATM PVTRLVNTAL DAVSANTQEV LDDIVRFCGN
DMLCYRADAP QELVERQSAK WDPVLGWLAD THGARVLQTS GIIYQPQPSD AIEAFERALQ
RYRDGVALAS LHVMTSLTGS AILALALADG ALTLFDAWDL AHLDENWTDE HWGSDMEAEA
RRAARFVDMQ SAYDVLRAAR A
|
|---|
| |