| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2255 |
|---|
| Symbol | |
|---|
| ID | 7386350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 1854760 |
|---|
| End bp | 1855272 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643651427 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002549621 |
|---|
| Protein GI | 222148664 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2847] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.347507 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGA CATTTTTAGC TTCAGCCATT GTCATCATGC TTGCCGCCAG CGGGGCTGCG
TCAGAAGAAA TGGATCATGC CGCTATGACG GCAAAGGGCG ATATGGCCGC GCCCGCGCAG
GCGATTACCG CGACACTTGG ATCGCTTAAG ATCAGCGATG GCTATTTGAA AGCGATGATC
CCGGGCCAGC CCGTCGGCGG TGGTTTCGTG ACGATCACCA ATACCGGCTC CGTGGAAGAT
AAGCTGATTG CAATCTCATC GCCGCGTGCC ATGCGGGTGG AATTGCATGA AATGGTCATG
CAAGGCACGA TCATGAAAAT GCGAAAAATA CCAGATGGTT TTGCCATTGC CCCTGGCGCC
ACATTGAAAA TGGAACCGGG CGGTTACCAT CTGATGTTCA TGGGTGTGCA GATGCCCTTC
AAGGCGAACC AGACTATACC GGTAACGTTA ACCTTCGAGA AGGCTGGTAA GCTCGAACTG
GCGATGCCCG TGGTGACGAT ACGCGGCAGG TAA
|
|---|
| Protein sequence | MTKTFLASAI VIMLAASGAA SEEMDHAAMT AKGDMAAPAQ AITATLGSLK ISDGYLKAMI
PGQPVGGGFV TITNTGSVED KLIAISSPRA MRVELHEMVM QGTIMKMRKI PDGFAIAPGA
TLKMEPGGYH LMFMGVQMPF KANQTIPVTL TFEKAGKLEL AMPVVTIRGR
|
|---|
| |